myRT

myRT report for GCA_009184265.1_ASM918426v1

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Seq: WEFY01000001.1 Enterococcus faecium strain VRECG18, whole genome shotgun sequence (2963338 bp)
Overview 1 RT 1: 2835457-2840497 bp Neighborhood of RT #1 [2835457, 2840511] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 2835457-2835600 bp Feature: gene Location: 2835693-2836877 bp Feature: domain Description: HTH_XRE Location: 2835723-2835867 bp Feature: domain Description: HTH_XRE Location: 2835723-2835867 bp Feature: domain Description: Rol_Rep_N Location: 2835900-2836164 bp Feature: domain Description: Rol_Rep_N Location: 2835900-28361 64 bp Feature: domain Description: Rep_trans Location: 2836188-2836800 bp Feature: domain Description: Rep_trans Location: 28361 88-2836800 bp Feature: gene Location: 2837757-2839667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2838090-2838828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2838090-2838828 bp Feature: domain Description: HNHc Note: nucleases Location: 2839383-2839548 bp Feature: domain Description: HNHc Note: nucleases Location: 2839383-2839548 bp Feature: gene Location: 2839855-2839995 bp Feature: gene Location: 2840008-2840511 bp Feature: domain Description: ArdA Location: 2840026-2840497 bp Feature: domain Description: ArdA Location: 2840026-2840497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: WEFY01000003.1 Enterococcus faecium strain VRECG18, whole genome shotgun sequence (65409 bp)
Overview 1 RT 1: 52854-58021 bp Neighborhood of RT #1 [52854, 58710] CwlT_like Spr RVT-GII HNHc VirB4 Feature: gene Location: 52854-53990 bp Feature: domain Description: CwlT_like Location: 53100-53577 bp Feature: domain Description: CwlT_like Location: 53100-53577 bp Feature: domain Description: Spr Location: 53601-53961 bp Feature: domain Description: Spr Location: 53601-53961 bp Feature: gene Location: 54012-54323 bp Feature: gene Location: 54520-56397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54835-55573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54835-55573 bp Feature: domain Description: HNHc Note: nucleases Location: 56131-56284 bp Feature: domain Description: HNHc Note: nucleases Location: 56131-562 84 bp Feature: gene Location: 56584-56817 bp Feature: gene Location: 57085-58710 bp Feature: domain Description: VirB4 Location: 57409-58021 bp Feature: domain Description: VirB4 Location: 57409-5802 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, Spr (COG0791), RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: WEFY01000004.1 Enterococcus faecium strain VRECG18, whole genome shotgun sequence (59584 bp)
Overview 1 RT 1: 44840-50693 bp Neighborhood of RT #1 [44840, 50812] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 44840-46534 bp Feature: domain Description: VirB4 Location: 45158-45842 bp Feature: domain Description: VirB4 Location: 45158-45842 bp Feature: gene Location: 46802-47035 bp Feature: gene Location: 47222-49099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47537-48275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4753 7-48275 bp Feature: domain Description: HNHc Note: nucleases Location: 48833-48986 bp Feature: domain Description: HNHc Note: nucleases Location: 4883 3 -48986 bp Feature: gene Location: 49287-49607 bp Feature: gene Location: 49607-50812 bp Feature: domain Description: Glucosaminidase Location: 49883-50279 bp Feature: domain Description: Glucosaminidase Location: 49883 -50279 bp Feature: domain Description: Peptidase_M23 Location: 50456-50693 bp Feature: domain Description: Peptidase_M23 Location: 50456-50693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)

Seq: WEFY01000005.1 Enterococcus faecium strain VRECG18, whole genome shotgun sequence (35486 bp)
Overview 1 RT 1: 20154-24802 bp Neighborhood of RT #1 [20154, 24831] Tra8 RVT-AbiP2 HsdM Rve Feature: gene Location: 20154-20315 bp Feature: gene Location: 20398-21351 bp Feature: domain Description: Tra8 Location: 20401-21328 bp Feature: domain Description: Tra8 Location: 204 01-21328 bp Feature: gene Location: 21329-22804 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 21677-22142 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 21677-2214 2 bp Feature: gene Location: 23142-24620 bp Feature: domain Description: HsdM Location: 23163-24588 bp Feature: domain Description: HsdM Location: 23163-24 588 bp Feature: gene Location: 24643-24831 bp Feature: domain Description: Rve Location: 24649-24802 bp Feature: domain Description: Rve Location: 24 64 9-24 802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-AbiP2, HsdM (COG0286), Rve (COG3316)

Seq: WEFY01000009.1 Enterococcus faecium strain VRECG18, whole genome shotgun sequence (2743 bp)
Overview 1 RT 1: 132-2429 bp Neighborhood of RT #1 [132, 2429] RVT-GII HNHc Feature: gene Location: 132-2009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1185 bp Feature: domain Description: HNHc Note: nucleases Location: 1743-1896 bp Feature: domain Description: HNHc Note: nucleases Location: 1743-1896 bp Feature: gene Location: 2196-2429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)