myRT

myRT report for GCA_009184325.1_ASM918432v1

Download annotations/find similar RTs

Seq: WEGD01000001.1 Enterococcus faecium strain VRECG13, whole genome shotgun sequence (2948646 bp)
Overview 1 RT 1: 1215915-1222555 bp 2 RT 2: 2789633-2795173 bp Neighborhood of RT #1 [1215915, 1222596] TcpE AAA_10 RVT-GII AAA_10 Transposase_mut Neighborhood of RT #2 [2789633, 2795199] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm Feature: gene Location: 1215915-1216304 bp Feature: domain Description: TcpE Location: 1215933-1216233 bp Feature: domain Description: TcpE Location: 1 21 5933-1 21 6233 bp Feature: gene Location: 1216291-1217841 bp Feature: domain Description: AAA_10 Location: 1217620-1217803 bp Feature: domain Description: AAA_1 0 Location: 1 21 7620-1 21 7803 bp Feature: gene Location: 1218538-1220364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1218838-1219537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 8838-1 21 9537 bp Feature: gene Location: 1220498-1221316 bp Feature: domain Description: AAA_10 Location: 1220504-1221302 bp Feature: domain Description: AAA_1 0 Location: 1 220504-1 221 302 bp Feature: gene Location: 1221409-1222596 bp Feature: domain Description: Transposase_mut Location: 1221412-1222555 bp Feature: domain Description: Transposase_mut Location: 1 221 41 2-1 222555 bp Feature: gene Location: 2789633-2789977 bp Feature: domain Description: RelB_DinJ Location: 2789843-2789969 bp Feature: domain Description: RelB_DinJ Location: 2789843-2789969 bp Feature: gene Location: 2790046-2791062 bp Feature: domain Description: FtsK_SpoIIIE Location: 2790703-2790943 bp Feature: domain Description: FtsK_SpoIIIE Location: 2790703-2790943 bp Feature: gene Location: 2791656-2793530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2792022-2792718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2792022-279271 8 bp Feature: domain Description: HNHc Note: nucleases Location: 2793258-2793417 bp Feature: domain Description: HNHc Note: nucleases Location: 2793258-279341 7 bp Feature: gene Location: 2793632-2794012 bp Feature: domain Description: FtsK Location: 2793647-2793887 bp Feature: domain Description: FtsK Location: 2793647-2793887 bp Feature: gene Location: 2794057-2795199 bp Feature: domain Description: Dcm Location: 2794060-2795173 bp Feature: domain Description: Dcm Location: 2794060-27951 73 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), AAA_10 (pfam12846), RVT-GII, Transposase_mut (pfam00872), RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), HNHc (smart00507), FtsK (COG1674), Dcm (COG0270)

Seq: WEGD01000003.1 Enterococcus faecium strain VRECG13, whole genome shotgun sequence (42238 bp)
Overview 1 RT 1: 29001-34138 bp Neighborhood of RT #1 [29001, 34167] Tra8 RVT-AbiP2 HsdM Rve Feature: gene Location: 29001-29162 bp Feature: gene Location: 29245-30198 bp Feature: domain Description: Tra8 Location: 29248-30175 bp Feature: domain Description: Tra8 Location: 2 92 48-30175 bp Feature: gene Location: 30176-31651 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 30524-30989 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3052 4-30989 bp Feature: gene Location: 31989-33467 bp Feature: domain Description: HsdM Location: 32010-33435 bp Feature: domain Description: HsdM Location: 32 010-33435 bp Feature: gene Location: 33490-34167 bp Feature: domain Description: Rve Location: 33499-34138 bp Feature: domain Description: Rve Location: 33499-34138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-AbiP2, HsdM (COG0286), Rve (COG3316)