myRT

myRT report for GCA_009207895.1_ASM920789v1

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Seq: WFJP01000126.1 Klebsiella pneumoniae strain 071I6 CEPHYTEN109_S45_R1.fastq_(paired)_contig_126, whole genome shotgun sequence (16741 bp)
Overview 1 RT 1: 1-2742 bp Neighborhood of RT #1 [1, 2742] RVT-GII Feature: gene Location: 1-255 bp Feature: gene Location: 385-1896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 790-1504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 790-1 504 bp Feature: gene Location: 2130-2360 bp Feature: gene Location: 2419-2742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WFJP01000041.1 Klebsiella pneumoniae strain 071I6 CEPHYTEN109_S45_R1.fastq_(paired)_contig_41, whole genome shotgun sequence (141268 bp)
Overview 1 RT 1: 649-7502 bp Neighborhood of RT #1 [649, 7519] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 649-1314 bp Feature: domain Description: INT_P4_C Location: 754-1312 bp Feature: domain Description: INT_P4_C Location: 754-1312 bp Feature: gene Location: 1575-2015 bp Feature: domain Description: Integrase_1 Location: 1581-1797 bp Feature: domain Description: Integrase_1 Location: 1581-1797 bp Feature: gene Location: 2072-4150 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2480-2924 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 480-2 92 4 bp Feature: gene Location: 4150-6759 bp Feature: domain Description: FimD Location: 4207-6748 bp Feature: domain Description: FimD Location: 42 07-6748 bp Feature: gene Location: 6791-7519 bp Feature: domain Description: FimC Location: 6839-7502 bp Feature: domain Description: FimC Location: 6839-7502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)