myRT

myRT report for GCA_009207925.1_ASM920792v1

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Seq: WFJO01000108.1 Klebsiella pneumoniae strain 071I7 071I7_S30_R1_(paired)_contig_108, whole genome shotgun sequence (48341 bp)
Overview 1 RT 1: 40825-47693 bp Neighborhood of RT #1 [40825, 47695] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 40825-41553 bp Feature: domain Description: FimC Location: 40873-41536 bp Feature: domain Description: FimC Location: 40873-41 536 bp Feature: gene Location: 41585-44194 bp Feature: domain Description: FimD Location: 41642-44183 bp Feature: domain Description: FimD Location: 41 642-441 83 bp Feature: gene Location: 44194-46272 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 44602-45046 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 44602-45046 bp Feature: gene Location: 46329-46769 bp Feature: domain Description: Integrase_1 Location: 46335-46551 bp Feature: domain Description: Integrase_1 Location: 46335-46551 bp Feature: gene Location: 47030-47695 bp Feature: domain Description: INT_P4_C Location: 47135-47693 bp Feature: domain Description: INT_P4_C Location: 471 35-47693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: WFJO01000023.1 Klebsiella pneumoniae strain 071I7 071I7_S30_R1_(paired)_contig_23, whole genome shotgun sequence (18889 bp)
Overview 1 RT 1: 13900-17170 bp Neighborhood of RT #1 [13900, 17184] RVT-GII PRK10276 Feature: gene Location: 13900-14115 bp Feature: gene Location: 14382-14612 bp Feature: gene Location: 14846-16357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15251-15965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152 51-15965 bp Feature: gene Location: 16408-16641 bp Feature: gene Location: 16759-17184 bp Feature: domain Description: PRK10276 Location: 16762-17170 bp Feature: domain Description: PRK102 76 Location: 16762 -17170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)