myRT

myRT report for GCA_009207955.1_ASM920795v1

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Seq: WFJR01000008.1 Klebsiella pneumoniae strain 071I4 contig_0008, whole genome shotgun sequence (174099 bp)
Overview 1 RT 1: 134495-141363 bp Neighborhood of RT #1 [134495, 141365] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 134495-135223 bp Feature: domain Description: FimC Location: 134543-135206 bp Feature: domain Description: FimC Location: 1 34543-1 35206 bp Feature: gene Location: 135255-137864 bp Feature: domain Description: FimD Location: 135312-137853 bp Feature: domain Description: FimD Location: 1 3531 2-1 37853 bp Feature: gene Location: 137864-139942 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 138272-138716 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 38272-1 3871 6 bp Feature: gene Location: 139999-140439 bp Feature: domain Description: Integrase_1 Location: 140005-140221 bp Feature: domain Description: Integrase_1 Location: 1 40005-1 40221 bp Feature: gene Location: 140700-141365 bp Feature: domain Description: INT_P4_C Location: 140805-141363 bp Feature: domain Description: INT_P4_C Location: 1 40805-1 41 363 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: WFJR01000042.1 Klebsiella pneumoniae strain 071I4 contig_0042, whole genome shotgun sequence (29883 bp)
Overview 1 RT 1: 17557-20741 bp Neighborhood of RT #1 [17557, 20741] PRK10276 RVT-GII Feature: gene Location: 17557-17982 bp Feature: domain Description: PRK10276 Location: 17560-17968 bp Feature: domain Description: PRK102 76 Location: 17560-17968 bp Feature: gene Location: 18100-18333 bp Feature: gene Location: 18384-19895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18789-19503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18789-19503 bp Feature: gene Location: 19781-20359 bp Feature: gene Location: 20418-20741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII