myRT

myRT report for GCA_009207975.1_ASM920797v1

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Seq: WFJQ01000124.1 Klebsiella pneumoniae strain 071I5 CEPHYTEN108_S44_R1.fastq_(paired)_contig_124, whole genome shotgun sequence (18641 bp)
Overview 1 RT 1: 13709-16979 bp Neighborhood of RT #1 [13709, 16993] RVT-GII PRK10276 Feature: gene Location: 13709-13924 bp Feature: gene Location: 14191-14421 bp Feature: gene Location: 14655-16166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15060-15774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5060-1 5774 bp Feature: gene Location: 16217-16450 bp Feature: gene Location: 16568-16993 bp Feature: domain Description: PRK10276 Location: 16571-16979 bp Feature: domain Description: PRK1 0276 Location: 1 6571 -1 6979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: WFJQ01000046.1 Klebsiella pneumoniae strain 071I5 CEPHYTEN108_S44_R1.fastq_(paired)_contig_46, whole genome shotgun sequence (107215 bp)
Overview 1 RT 1: 649-7502 bp Neighborhood of RT #1 [649, 7519] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 649-1314 bp Feature: domain Description: INT_P4_C Location: 754-1312 bp Feature: domain Description: INT_P4_C Location: 754-1312 bp Feature: gene Location: 1575-2015 bp Feature: domain Description: Integrase_1 Location: 1581-1797 bp Feature: domain Description: Integrase_1 Location: 1581-1797 bp Feature: gene Location: 2072-4150 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2480-2924 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 480-2 92 4 bp Feature: gene Location: 4150-6759 bp Feature: domain Description: FimD Location: 4207-6748 bp Feature: domain Description: FimD Location: 42 07-6748 bp Feature: gene Location: 6791-7519 bp Feature: domain Description: FimC Location: 6839-7502 bp Feature: domain Description: FimC Location: 6839-7502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)