myRT

myRT report for GCA_009208715.1_ASM920871v1

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Seq: WFJT01000010.1 Klebsiella pneumoniae strain 071I1 CEPHYTEN104_S42_R1.fastq_(paired)_contig_10, whole genome shotgun sequence (107335 bp)
Overview 1 RT 1: 99491-106359 bp Neighborhood of RT #1 [99491, 106361] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 99491-100219 bp Feature: domain Description: FimC Location: 99524-100202 bp Feature: domain Description: FimC Location: 99524-1 00202 bp Feature: gene Location: 100251-102860 bp Feature: domain Description: FimD Location: 100308-102849 bp Feature: domain Description: FimD Location: 1 00308-1 02849 bp Feature: gene Location: 102860-104938 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 103268-103712 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 03268-1 0371 2 bp Feature: gene Location: 104995-105435 bp Feature: domain Description: Integrase_1 Location: 105001-105217 bp Feature: domain Description: Integrase_1 Location: 1 05001 -1 0521 7 bp Feature: gene Location: 105696-106361 bp Feature: domain Description: INT_P4_C Location: 105801-106359 bp Feature: domain Description: INT_P4_C Location: 1 05801 -1 06359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)