myRT

myRT report for GCA_009208775.1_ASM920877v1

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Seq: WFLM01000003.1 Silvanigrella paludirubra strain SP-Ram-0.45-NSY-1 NODE_12-NODE_3-NODE_12, whole genome shotgun sequence (683688 bp)
Overview 1 RT 1: 559187-563585 bp Neighborhood of RT #1 [559187, 563599] RVT-GII GIIM HTH_XRE RelE_StbE Feature: gene Location: 559187-559918 bp Feature: gene Location: 559947-560708 bp Feature: gene Location: 560824-562065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 561028-561685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 561 028-561 685 bp Feature: domain Description: GIIM Note: maturase Location: 561772-561976 bp Feature: domain Description: GIIM Note: maturase Location: 561 772-561 976 bp Feature: gene Location: 563005-563376 bp Feature: domain Description: HTH_XRE Location: 563125-563287 bp Feature: domain Description: HTH_XRE Location: 5631 25-563287 bp Feature: gene Location: 563324-563599 bp Feature: domain Description: RelE_StbE Location: 563336-563585 bp Feature: domain Description: RelE_StbE Location: 563336-563585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_XRE (smart00530), RelE_StbE (TIGR02385)

Seq: WFLM01000002.1 Silvanigrella paludirubra strain SP-Ram-0.45-NSY-1 NODE_2_length_784863_cov_43.990881, whole genome shotgun sequence (784863 bp)
Overview 1 RT 1: 606093-612513 bp Neighborhood of RT #1 [606093, 612566] DsbB PRK02110 RVT-GII GIIM Beta-lactamase Feature: gene Location: 606093-606608 bp Feature: domain Description: DsbB Location: 606105-606363 bp Feature: domain Description: DsbB Location: 606105-606363 bp Feature: domain Description: PRK02110 Location: 606381-606459 bp Feature: domain Description: PRK02 110 Location: 606381-606459 bp Feature: gene Location: 606636-608627 bp Feature: gene Location: 608963-610285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 609224-609914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6092 2 4-609914 bp Feature: domain Description: GIIM Note: maturase Location: 609986-610202 bp Feature: domain Description: GIIM Note: maturase Location: 609986-6102 02 bp Feature: gene Location: 610907-611374 bp Feature: gene Location: 611391-612566 bp Feature: domain Description: Beta-lactamase Location: 611583-612513 bp Feature: domain Description: Beta-lactamase Location: 611583-612 513 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DsbB (pfam02600), PRK02110 (disulfide bond formation protein B; Provisional), RVT-GII, GIIM (pfam08388), Beta-lactamase (pfam00144)