myRT

myRT report for GCA_009296175.1_ASM929617v1

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Seq: VOSK01000015.1 Microvirga tunisiensis strain Lmie10 NODE_15_length_59477_cov_98.9602_ID_8023, whole genome shotgun sequence (59477 bp)
Overview 1 RT 1: 56917-59476 bp Neighborhood of RT #1 [56917, 59475] AraC_binding_2 HTH_18 RVT-GII Feature: gene Location: 56917-57981 bp Feature: domain Description: AraC_binding_2 Location: 57055-57592 bp Feature: domain Description: AraC_binding_2 Location: 57055-57592 bp Feature: domain Description: HTH_18 Location: 57721-57961 bp Feature: domain Description: HTH_1 8 Location: 57721 -57961 bp Feature: gene Location: 58254-58508 bp Feature: gene Location: 59137-59475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59332-59476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59332-59476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC_binding_2 (pfam14525), HTH_18 (pfam12833), RVT-GII

Seq: VOSK01000163.1 Microvirga tunisiensis strain Lmie10 NODE_163_length_14884_cov_149.407_ID_21289, whole genome shotgun sequence (14884 bp)
Overview 1 RT 1: 2-3320 bp Neighborhood of RT #1 [2, 3340] HTH_17 HTH_17 RVT-GII PBP2_polar_AA HisM Feature: gene Location: 2-451 bp Feature: domain Description: HTH_17 Location: 113-236 bp Feature: domain Description: HTH_17 Location: 113-2 36 bp Feature: domain Description: HTH_17 Location: 287-410 bp Feature: domain Description: HTH_17 Location: 2 87-410 bp Feature: gene Location: 463-954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712-943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712 -943 bp Feature: gene Location: 1667-2533 bp Feature: domain Description: PBP2_polar_AA Location: 1781-2459 bp Feature: domain Description: PBP2 _polar_AA Location: 1781-2 459 bp Feature: gene Location: 2594-3340 bp Feature: domain Description: HisM Location: 2678-3320 bp Feature: domain Description: HisM Location: 2 678-332 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), RVT-GII, PBP2_polar_AA (cd13693), HisM (COG0765)

Seq: VOSK01000181.1 Microvirga tunisiensis strain Lmie10 NODE_181_length_13333_cov_102.923_ID_19531, whole genome shotgun sequence (13333 bp)
Overview 1 RT 1: 3-3672 bp Neighborhood of RT #1 [3, 3977] RVT-GII GIIM FecR tand_rpt_95 vWFA Feature: gene Location: 3-842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186-465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186-465 bp Feature: domain Description: GIIM Note: maturase Location: 537-744 bp Feature: domain Description: GIIM Note: maturase Location: 53 7-744 bp Feature: gene Location: 1271-2848 bp Feature: domain Description: FecR Location: 1700-1976 bp Feature: domain Description: FecR Location: 1700-1976 bp Feature: gene Location: 2883-3977 bp Feature: domain Description: tand_rpt_95 Location: 2889-2955 bp Feature: domain Description: tand_rpt_95 Location: 2889-2955 bp Feature: domain Description: vWFA Location: 3126-3672 bp Feature: domain Description: vWFA Location: 3 126-3 672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), FecR (pfam04773), tand_rpt_95 (NF012211), vWFA (cl00057)

Seq: VOSK01000194.1 Microvirga tunisiensis strain Lmie10 NODE_194_length_12754_cov_166.733_ID_21577, whole genome shotgun sequence (12754 bp)
Overview 1 RT 1: 114-3362 bp Neighborhood of RT #1 [114, 3373] RVT-GII GIIM HNHc Tas ChaC Feature: gene Location: 114-1250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123-555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123-555 bp Feature: domain Description: GIIM Note: maturase Location: 609-843 bp Feature: domain Description: GIIM Note: maturase Location: 609-84 3 bp Feature: domain Description: HNHc Note: nucleases Location: 1044-1218 bp Feature: domain Description: HNHc Note: nucleases Location: 104 4 -1218 bp Feature: gene Location: 1589-2566 bp Feature: domain Description: Tas Location: 1592-2537 bp Feature: domain Description: Tas Location: 1592-2537 bp Feature: gene Location: 2678-3373 bp Feature: domain Description: ChaC Location: 2846-3362 bp Feature: domain Description: ChaC Location: 284 6-3362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), Tas (COG0667), ChaC (pfam04752)

Seq: VOSK01000245.1 Microvirga tunisiensis strain Lmie10 NODE_245_length_9606_cov_93.4449_ID_24301, whole genome shotgun sequence (9606 bp)
Overview 1 RT 1: 106-848 bp Neighborhood of RT #1 [106, 848] RVT-GII Feature: gene Location: 106-291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109-280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109-280 bp Feature: gene Location: 305-478 bp Feature: gene Location: 621-848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VOSK01000283.1 Microvirga tunisiensis strain Lmie10 NODE_283_length_8000_cov_107.498_ID_26025, whole genome shotgun sequence (8000 bp)
Overview 1 RT 1: 6671-7842 bp Neighborhood of RT #1 [6671, 7997] RVT-GII GIIM Feature: gene Location: 6671-6970 bp Feature: gene Location: 7010-7234 bp Feature: gene Location: 7431-7997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7437-7566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7437-756 6 bp Feature: domain Description: GIIM Note: maturase Location: 7617-7842 bp Feature: domain Description: GIIM Note: maturase Location: 76 17-7842 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VOSK01000043.1 Microvirga tunisiensis strain Lmie10 NODE_43_length_39091_cov_86.7062_ID_11325, whole genome shotgun sequence (39091 bp)
Overview 1 RT 1: 35914-38943 bp Neighborhood of RT #1 [35914, 39029] PRK10858 Nnr1 Nnr2 RVT-GII GIIM Feature: gene Location: 35914-36252 bp Feature: domain Description: PRK10858 Location: 35917-36250 bp Feature: domain Description: PRK10858 Location: 35917 -36250 bp Feature: gene Location: 36431-37918 bp Feature: domain Description: Nnr1 Location: 36452-37007 bp Feature: domain Description: Nnr1 Location: 36452-37 007 bp Feature: domain Description: Nnr2 Location: 37091-37904 bp Feature: domain Description: Nnr2 Location: 37 091-37 904 bp Feature: gene Location: 38283-39029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38322-38631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38322-38631 bp Feature: domain Description: GIIM Note: maturase Location: 38709-38943 bp Feature: domain Description: GIIM Note: maturase Location: 387 09-38943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10858 (nitrogen regulatory protein P-II), Nnr1 (COG0062), Nnr2 (COG0063), RVT-GII, GIIM (pfam08388)

Seq: VOSK01000642.1 Microvirga tunisiensis strain Lmie10 NODE_643_length_1979_cov_359.165_ID_66718, whole genome shotgun sequence (1979 bp)
Overview 1 RT 1: 425-1523 bp Neighborhood of RT #1 [425, 1900] RVT-GII Feature: gene Location: 425-1900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 833-1523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 33-1523 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VOSK01000661.1 Microvirga tunisiensis strain Lmie10 NODE_662_length_1877_cov_206.969_ID_66640, whole genome shotgun sequence (1877 bp)
Overview 1 RT 1: 84-1407 bp Neighborhood of RT #1 [84, 1562] RVT-GII GIIM Feature: gene Location: 84-1562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 513-1131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 513-1131 bp Feature: domain Description: GIIM Note: maturase Location: 1182-1407 bp Feature: domain Description: GIIM Note: maturase Location: 1182-1407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VOSK01000730.1 Microvirga tunisiensis strain Lmie10 NODE_731_length_1509_cov_85.958_ID_48811, whole genome shotgun sequence (1509 bp)
Overview 1 RT 1: 2-960 bp Neighborhood of RT #1 [2, 1328] RVT-GII Intron_maturas2 Feature: gene Location: 2-169 bp Feature: gene Location: 90-1328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120-588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120-588 bp Feature: domain Description: Intron_maturas2 Location: 672-960 bp Feature: domain Description: Intron_maturas2 Location: 672-960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: VOSK01000758.1 Microvirga tunisiensis strain Lmie10 NODE_759_length_1356_cov_217.128_ID_67314, whole genome shotgun sequence (1356 bp)
Overview 1 RT 1: 2-1355 bp Neighborhood of RT #1 [2, 1355] RVT-GII Feature: gene Location: 2-913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308-914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308-914 bp Feature: gene Location: 1071-1355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VOSK01000817.1 Microvirga tunisiensis strain Lmie10 NODE_818_length_1127_cov_911.699_ID_67230, whole genome shotgun sequence (1127 bp)
Overview 1 RT 1: 3-1125 bp Neighborhood of RT #1 [3, 1124] RVT-GII Feature: gene Location: 3-473 bp Feature: gene Location: 543-1124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750-1125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750-112 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VOSK01000838.1 Microvirga tunisiensis strain Lmie10 NODE_839_length_1067_cov_88.9447_ID_51697, whole genome shotgun sequence (1067 bp)
Overview 1 RT 1: 2-948 bp Neighborhood of RT #1 [2, 959] RVT-GII Feature: gene Location: 2-127 bp Feature: gene Location: 453-959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720-948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720-948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VOSK01000839.1 Microvirga tunisiensis strain Lmie10 NODE_840_length_1052_cov_209.456_ID_52459, whole genome shotgun sequence (1052 bp)
Overview 1 RT 1: 208-961 bp Neighborhood of RT #1 [208, 1050] RVT-GII GIIM Feature: gene Location: 208-1050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391-673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391-673 bp Feature: domain Description: GIIM Note: maturase Location: 745-961 bp Feature: domain Description: GIIM Note: maturase Location: 745-961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VOSK01000910.1 Microvirga tunisiensis strain Lmie10 NODE_911_length_785_cov_1595.2_ID_68146, whole genome shotgun sequence (785 bp)
Overview 1 RT 1: 2-626 bp Neighborhood of RT #1 [2, 784] RVT-GII GIIM Feature: gene Location: 2-784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-365 bp Feature: domain Description: GIIM Note: maturase Location: 416-626 bp Feature: domain Description: GIIM Note: maturase Location: 416-626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)