myRT

myRT report for GCA_009296195.1_ASM929619v1

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Seq: VOSJ01001019.1 Microvirga tunisiensis strain M8 NODE_1020_length_663_cov_1219.73_ID_70520, whole genome shotgun sequence (663 bp)
Overview 1 RT 1: 2-661 bp Neighborhood of RT #1 [2, 660] group_II_RT_mat RVT-GII Feature: gene Location: 2-142 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8-134 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8-1 34 bp Feature: gene Location: 325-660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331-661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331 -661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII

Seq: VOSJ01001039.1 Microvirga tunisiensis strain M8 NODE_1040_length_618_cov_93.5682_ID_74258, whole genome shotgun sequence (618 bp)
Overview 1 RT 1: 2-617 bp Neighborhood of RT #1 [2, 616] RVT-GII GIIM Feature: gene Location: 2-616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-335 bp Feature: domain Description: GIIM Note: maturase Location: 389-617 bp Feature: domain Description: GIIM Note: maturase Location: 389-617 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VOSJ01001060.1 Microvirga tunisiensis strain M8 NODE_1061_length_578_cov_1074.33_ID_73558, whole genome shotgun sequence (578 bp)
Overview 1 RT 1: 1-577 bp Neighborhood of RT #1 [1, 576] RVT_N RVT-GII Feature: gene Location: 1-576 bp Feature: domain Description: RVT_N Location: 13-166 bp Feature: domain Description: RVT_N Location: 13 -166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220-577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220-577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: VOSJ01000164.1 Microvirga tunisiensis strain M8 NODE_164_length_14884_cov_174_ID_22259, whole genome shotgun sequence (14884 bp)
Overview 1 RT 1: 11545-14842 bp Neighborhood of RT #1 [11545, 14883] HisM PBP2_polar_AA RVT-GII HTH_17 HTH_17 Feature: gene Location: 11545-12309 bp Feature: domain Description: HisM Location: 11647-12289 bp Feature: domain Description: HisM Location: 1164 7-12289 bp Feature: gene Location: 12352-13242 bp Feature: domain Description: PBP2_polar_AA Location: 12490-13168 bp Feature: domain Description: PBP2_polar_AA Location: 124 90-13168 bp Feature: gene Location: 13931-14422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14180-14411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 180-14 4 11 bp Feature: gene Location: 14434-14883 bp Feature: domain Description: HTH_17 Location: 14545-14668 bp Feature: domain Description: HTH_17 Location: 14 54 5-14 668 bp Feature: domain Description: HTH_17 Location: 14719-14842 bp Feature: domain Description: HTH_17 Location: 14 719-14 84 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HisM (COG0765), PBP2_polar_AA (cd13693), RVT-GII, HTH_17 (pfam12728)

Seq: VOSJ01000183.1 Microvirga tunisiensis strain M8 NODE_183_length_13310_cov_117.651_ID_20365, whole genome shotgun sequence (13310 bp)
Overview 1 RT 1: 3-3672 bp Neighborhood of RT #1 [3, 3977] RVT-GII GIIM FecR tand_rpt_95 vWFA Feature: gene Location: 3-842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186-465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186-465 bp Feature: domain Description: GIIM Note: maturase Location: 537-744 bp Feature: domain Description: GIIM Note: maturase Location: 5 37-744 bp Feature: gene Location: 1271-2848 bp Feature: domain Description: FecR Location: 1700-1976 bp Feature: domain Description: FecR Location: 1700-1976 bp Feature: gene Location: 2883-3977 bp Feature: domain Description: tand_rpt_95 Location: 2889-2955 bp Feature: domain Description: tand_rpt_95 Location: 2889-295 5 bp Feature: domain Description: vWFA Location: 3126-3672 bp Feature: domain Description: vWFA Location: 3126-3672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), FecR (pfam04773), tand_rpt_95 (NF012211), vWFA (cl00057)

Seq: VOSJ01000198.1 Microvirga tunisiensis strain M8 NODE_198_length_12821_cov_203.668_ID_27797, whole genome shotgun sequence (12821 bp)
Overview 1 RT 1: 130-3378 bp Neighborhood of RT #1 [130, 3389] RVT-GII GIIM HNHc Tas ChaC Feature: gene Location: 130-1266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139-571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139-571 bp Feature: domain Description: GIIM Note: maturase Location: 625-859 bp Feature: domain Description: GIIM Note: maturase Location: 6 25-859 bp Feature: domain Description: HNHc Note: nucleases Location: 1060-1234 bp Feature: domain Description: HNHc Note: nucleases Location: 106 0-1234 bp Feature: gene Location: 1605-2582 bp Feature: domain Description: Tas Location: 1608-2553 bp Feature: domain Description: Tas Location: 16 08-2553 bp Feature: gene Location: 2694-3389 bp Feature: domain Description: ChaC Location: 2862-3378 bp Feature: domain Description: ChaC Location: 286 2-3378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), Tas (COG0667), ChaC (pfam04752)

Seq: VOSJ01000241.1 Microvirga tunisiensis strain M8 NODE_241_length_10407_cov_109.239_ID_27055, whole genome shotgun sequence (10407 bp)
Overview 1 RT 1: 63-3104 bp Neighborhood of RT #1 [63, 3259] RVT-GII GIIM TolBN TPR TPR TPR_16 Feature: gene Location: 63-767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102-390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102-390 bp Feature: domain Description: GIIM Note: maturase Location: 462-678 bp Feature: domain Description: GIIM Note: maturase Location: 462-67 8 bp Feature: gene Location: 1036-1344 bp Feature: gene Location: 1319-3259 bp Feature: domain Description: TolBN Location: 1997-2405 bp Feature: domain Description: TolBN Location: 1997 -2405 bp Feature: domain Description: TPR Location: 2507-2615 bp Feature: domain Description: TPR Location: 2507 -2615 bp Feature: domain Description: TPR Location: 2657-2891 bp Feature: domain Description: TPR Location: 2657 -2891 bp Feature: domain Description: TPR_16 Location: 2933-3104 bp Feature: domain Description: TPR_16 Location: 2933-3104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TolBN (COG5616), TPR (smart00028), TPR_16 (pfam13432)

Seq: VOSJ01000265.1 Microvirga tunisiensis strain M8 NODE_265_length_9606_cov_104.344_ID_25349, whole genome shotgun sequence (9606 bp)
Overview 1 RT 1: 106-848 bp Neighborhood of RT #1 [106, 848] RVT-GII Feature: gene Location: 106-291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109-280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109-28 0 bp Feature: gene Location: 305-478 bp Feature: gene Location: 621-848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VOSJ01000307.1 Microvirga tunisiensis strain M8 NODE_307_length_8000_cov_127.571_ID_27607, whole genome shotgun sequence (8000 bp)
Overview 1 RT 1: 6671-7842 bp Neighborhood of RT #1 [6671, 7997] RVT-GII GIIM Feature: gene Location: 6671-6970 bp Feature: gene Location: 7010-7234 bp Feature: gene Location: 7431-7997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7437-7566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7437-7566 bp Feature: domain Description: GIIM Note: maturase Location: 7617-7842 bp Feature: domain Description: GIIM Note: maturase Location: 7617-7842 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VOSJ01000039.1 Microvirga tunisiensis strain M8 NODE_39_length_38958_cov_95.3811_ID_12078, whole genome shotgun sequence (38958 bp)
Overview 1 RT 1: 35915-38869 bp Neighborhood of RT #1 [35915, 38955] PRK10858 Nnr1 Nnr2 RVT-GII GIIM Feature: gene Location: 35915-36253 bp Feature: domain Description: PRK10858 Location: 35918-36251 bp Feature: domain Description: PRK10 858 Location: 35918-36251 bp Feature: gene Location: 36432-37919 bp Feature: domain Description: Nnr1 Location: 36453-37008 bp Feature: domain Description: Nnr1 Location: 36453-37008 bp Feature: domain Description: Nnr2 Location: 37092-37905 bp Feature: domain Description: Nnr2 Location: 37092-37905 bp Feature: gene Location: 38284-38955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38287-38557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38287-38557 bp Feature: domain Description: GIIM Note: maturase Location: 38635-38869 bp Feature: domain Description: GIIM Note: maturase Location: 38635-38869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10858 (nitrogen regulatory protein P-II), Nnr1 (COG0062), Nnr2 (COG0063), RVT-GII, GIIM (pfam08388)

Seq: VOSJ01000689.1 Microvirga tunisiensis strain M8 NODE_690_length_1979_cov_502.998_ID_72104, whole genome shotgun sequence (1979 bp)
Overview 1 RT 1: 425-1523 bp Neighborhood of RT #1 [425, 1900] RVT-GII Feature: gene Location: 425-1900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 833-1523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 833-1523 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VOSJ01000709.1 Microvirga tunisiensis strain M8 NODE_710_length_1877_cov_260.241_ID_72030, whole genome shotgun sequence (1877 bp)
Overview 1 RT 1: 84-1407 bp Neighborhood of RT #1 [84, 1562] RVT-GII GIIM Feature: gene Location: 84-1562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 513-1131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 513-1131 bp Feature: domain Description: GIIM Note: maturase Location: 1182-1407 bp Feature: domain Description: GIIM Note: maturase Location: 1182-1407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VOSJ01000778.1 Microvirga tunisiensis strain M8 NODE_779_length_1509_cov_120.262_ID_51777, whole genome shotgun sequence (1509 bp)
Overview 1 RT 1: 2-960 bp Neighborhood of RT #1 [2, 1328] RVT-GII Intron_maturas2 Feature: gene Location: 2-169 bp Feature: gene Location: 90-1328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120-588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120-588 bp Feature: domain Description: Intron_maturas2 Location: 672-960 bp Feature: domain Description: Intron_maturas2 Location: 672-960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: VOSJ01000811.1 Microvirga tunisiensis strain M8 NODE_812_length_1356_cov_271.771_ID_72758, whole genome shotgun sequence (1356 bp)
Overview 1 RT 1: 2-1355 bp Neighborhood of RT #1 [2, 1355] RVT-GII Feature: gene Location: 2-913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308-914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308-914 bp Feature: gene Location: 1071-1355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VOSJ01000877.1 Microvirga tunisiensis strain M8 NODE_878_length_1127_cov_978.845_ID_72644, whole genome shotgun sequence (1127 bp)
Overview 1 RT 1: 3-1125 bp Neighborhood of RT #1 [3, 1124] RVT-GII Feature: gene Location: 3-473 bp Feature: gene Location: 543-1124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750-1125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750-1125 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VOSJ01000898.1 Microvirga tunisiensis strain M8 NODE_899_length_1067_cov_125.406_ID_55001, whole genome shotgun sequence (1067 bp)
Overview 1 RT 1: 2-948 bp Neighborhood of RT #1 [2, 959] RVT-GII Feature: gene Location: 2-127 bp Feature: gene Location: 453-959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720-948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720-948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VOSJ01000970.1 Microvirga tunisiensis strain M8 NODE_971_length_785_cov_1796.14_ID_72056, whole genome shotgun sequence (785 bp)
Overview 1 RT 1: 2-626 bp Neighborhood of RT #1 [2, 784] RVT-GII GIIM Feature: gene Location: 2-784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-365 bp Feature: domain Description: GIIM Note: maturase Location: 416-626 bp Feature: domain Description: GIIM Note: maturase Location: 416-626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)