myRT

myRT report for GCA_009360315.1_ASM936031v1

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Seq: SPFK01000049.1 Pseudomonas sp. isolate RQ_Bin_16 Contig_000000012143, whole genome shotgun sequence (10224 bp)
Overview 1 RT 1: 4456-10169 bp Neighborhood of RT #1 [4456, 10222] dut PRK05579 RVT_N RVT-GII GIIM HNHc PRK00024 PBP2_DppA_like Feature: gene Location: 4456-4911 bp Feature: domain Description: dut Location: 4462-4906 bp Feature: domain Description: dut Location: 4462-4906 bp Feature: gene Location: 4914-6122 bp Feature: domain Description: PRK05579 Location: 4920-6114 bp Feature: domain Description: PRK05579 Location: 4920-61 1 4 bp Feature: gene Location: 6330-8063 bp Feature: RT Description: RVT_N Location: 6390-6633 bp Feature: RT Description: RVT_N Location: 6390-6633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6681-7332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6681 -7332 bp Feature: domain Description: GIIM Note: maturase Location: 7407-7638 bp Feature: domain Description: GIIM Note: maturase Location: 7407-7638 bp Feature: domain Description: HNHc Note: nucleases Location: 7866-8022 bp Feature: domain Description: HNHc Note: nucleases Location: 7866-8022 bp Feature: gene Location: 9195-9869 bp Feature: domain Description: PRK00024 Location: 9198-9867 bp Feature: domain Description: PRK00024 Location: 91 98-9867 bp Feature: gene Location: 9956-10222 bp Feature: domain Description: PBP2_DppA_like Location: 9959-10169 bp Feature: domain Description: PBP2_DppA_like Location: 9959-1 01 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), PRK05579 (bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK00024 (DNA repair protein RadC), PBP2_DppA_like (cd08493)