myRT

myRT report for GCA_009362045.1_ASM936204v1

Download annotations/find similar RTs

Seq: VOTI01000001.1 Escherichia coli strain WU1149 NODE_1_length_920452_cov_441.632712, whole genome shotgun sequence (920452 bp)
Overview 1 RT 1: 463998-468975 bp Neighborhood of RT #1 [463998, 468975] RVT-UG16 PRK13889 Feature: gene Location: 463998-464252 bp Feature: gene Location: 464197-464718 bp Feature: gene Location: 464847-466331 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 465210-465618 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 46521 0-46561 8 bp Feature: gene Location: 466469-467962 bp Feature: domain Description: PRK13889 Location: 466472-467072 bp Feature: domain Description: PRK1 3889 Location: 466472-467072 bp Feature: gene Location: 468610-468975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG16, PRK13889 (conjugal transfer relaxase TraA; Provisional)

Seq: VOTI01000008.1 Escherichia coli strain WU1149 NODE_8_length_193800_cov_436.190685, whole genome shotgun sequence (193800 bp)
Overview 1 RT 1: 98665-104575 bp Neighborhood of RT #1 [98665, 104575] HTH_36 RVT-AbiP2 RVT-AbiP2 DUF4062 Feature: gene Location: 98665-99120 bp Feature: gene Location: 100001-100510 bp Feature: domain Description: HTH_36 Location: 100187-100343 bp Feature: domain Description: HTH_36 Location: 100187-100343 bp Feature: gene Location: 100718-101497 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 101150-101453 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 101150-101453 bp Feature: gene Location: 101427-102218 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 101439-101607 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 101439-101607 bp Feature: gene Location: 102619-103956 bp Feature: domain Description: DUF4062 Location: 102652-102895 bp Feature: domain Description: DUF4062 Location: 102 652 -102 895 bp Feature: gene Location: 103994-104575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), RVT-AbiP2, DUF4062 (pfam13271)