myRT

myRT report for GCA_009362195.1_ASM936219v1

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Seq: VOSZ01000100.1 Escherichia coli strain WU153 NODE_103_length_1924_cov_1.498105, whole genome shotgun sequence (1924 bp)
Overview 1 RT 1: 2-1641 bp Neighborhood of RT #1 [2, 1808] RVT-UNC L1-EN Feature: gene Location: 2-1255 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 926-1223 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 926-1 223 bp Feature: gene Location: 1317-1808 bp Feature: domain Description: L1-EN Location: 1332-1641 bp Feature: domain Description: L1 -EN Location: 1 332-1 641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs/RVT-GII/RVT-CRISPR/RVT-UG1(RVT-UNC), L1-EN (cd09076)

Seq: VOSZ01000118.1 Escherichia coli strain WU153 NODE_122_length_1681_cov_18.337072, whole genome shotgun sequence (1681 bp)
Overview 1 RT 1: 3-1221 bp Neighborhood of RT #1 [3, 1538] RVT-CRISPR-like DUF1891 Feature: gene Location: 3-1538 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 375-972 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 375-972 bp Feature: domain Description: DUF1891 Location: 1098-1221 bp Feature: domain Description: DUF1891 Location: 1098-12 2 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, DUF1891 (pfam09004)

Seq: VOSZ01000126.1 Escherichia coli strain WU153 NODE_130_length_1620_cov_6.187946, whole genome shotgun sequence (1620 bp)
Overview 1 RT 1: 3-1598 bp Neighborhood of RT #1 [3, 1618] RVT-CRISPR-like SPRY_PRY_C-I_1 Feature: gene Location: 3-716 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 228-663 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 228-663 bp Feature: gene Location: 841-1116 bp Feature: gene Location: 1130-1618 bp Feature: domain Description: SPRY_PRY_C-I_1 Location: 1133-1598 bp Feature: domain Description: SPRY_PRY_C-I_1 Location: 113 3 -1598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, SPRY_PRY_C-I_1 (cd13733)

Seq: VOSZ01000151.1 Escherichia coli strain WU153 NODE_155_length_1420_cov_1.599404, whole genome shotgun sequence (1420 bp)
Overview 1 RT 1: 1-1417 bp Neighborhood of RT #1 [1, 1417] RVT-UG11 RT_RNaseH Feature: gene Location: 1-1164 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 406-559 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4 06-559 bp Feature: domain Description: RT_RNaseH Location: 829-1150 bp Feature: domain Description: RT_RNaseH Location: 829-1150 bp Feature: gene Location: 1244-1417 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, RT_RNaseH (pfam17917)

Seq: VOSZ01000163.1 Escherichia coli strain WU153 NODE_169_length_1305_cov_1.785831, whole genome shotgun sequence (1305 bp)
Overview 1 RT 1: 1-1291 bp Neighborhood of RT #1 [1, 1302] RVT-UG26 RNase_HI_RT_Ty3 Feature: gene Location: 1-1302 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 487-637 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 487-637 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 928-1291 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 928-1291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, RNase_HI_RT_Ty3 (cd09274)

Seq: VOSZ01000215.1 Escherichia coli strain WU153 NODE_221_length_1045_cov_1.394439, whole genome shotgun sequence (1045 bp)
Overview 1 RT 1: 464-1044 bp Neighborhood of RT #1 [464, 1044] RVT-CRISPR-like Feature: gene Location: 464-706 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 500-665 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 500-6 6 5 bp Feature: gene Location: 793-1044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VOSZ01000228.1 Escherichia coli strain WU153 NODE_236_length_1008_cov_2.194206, whole genome shotgun sequence (1008 bp)
Overview 1 RT 1: 2-503 bp Neighborhood of RT #1 [2, 565] RVT-CRISPR-like Feature: gene Location: 2-565 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 356-503 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 356-503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VOSZ01000049.1 Escherichia coli strain WU153 NODE_49_length_5527_cov_5.537248, whole genome shotgun sequence (5527 bp)
Overview 1 RT 1: 3-4030 bp Neighborhood of RT #1 [3, 4030] RVT-UNC Feature: gene Location: 3-1352 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 462-930 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 462-930 bp Feature: gene Location: 1727-4117 bp Feature: gene Location: 3494-4030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG19/RVT-UG5/RVT-UG25/RVT-DGRs(RVT-UNC)

Seq: VOSZ01000058.1 Escherichia coli strain WU153 NODE_59_length_4162_cov_8.905531, whole genome shotgun sequence (4162 bp)
Overview 1 RT 1: 2-4159 bp Neighborhood of RT #1 [2, 4159] ExoIII-like_AP-endo Exo_endo_phos_2 RVT-UNC Lipase_GDSL_2 Feature: gene Location: 2-187 bp Feature: gene Location: 322-3342 bp Feature: domain Description: ExoIII-like_AP-endo Location: 475-577 bp Feature: domain Description: ExoIII-like_AP-endo Location: 475-577 bp Feature: domain Description: Exo_endo_phos_2 Location: 778-1093 bp Feature: domain Description: Exo_endo_phos_2 Location: 778-109 3 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2053-2644 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2053-2644 bp Feature: gene Location: 3421-4011 bp Feature: domain Description: Lipase_GDSL_2 Location: 3595-3964 bp Feature: domain Description: Lipase_GDSL_2 Location: 359 5-39 64 bp Feature: gene Location: 3935-4159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ExoIII-like_AP-endo (cd09086), Exo_endo_phos_2 (pfam14529), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC), Lipase_GDSL_2 (pfam13472)

Seq: VOSZ01000005.1 Escherichia coli strain WU153 NODE_5_length_258490_cov_451.060562, whole genome shotgun sequence (258490 bp)
Overview 1 RT 1: 33440-38343 bp Neighborhood of RT #1 [33440, 38351] RVT-Retrons HTH_1 PBP2_CrgA_like_5 Feature: gene Location: 33440-33634 bp Feature: gene Location: 33917-34885 bp Feature: gene Location: 34872-35804 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34974-35565 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34974-35565 bp Feature: gene Location: 36398-36940 bp Feature: gene Location: 37467-38351 bp Feature: domain Description: HTH_1 Location: 37491-37665 bp Feature: domain Description: HTH_1 Location: 37491-37665 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 37746-38343 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 37746-38343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_1 (pfam00126), PBP2_CrgA_like_5 (cd08474)

Seq: VOSZ01000063.1 Escherichia coli strain WU153 NODE_65_length_3713_cov_5.056931, whole genome shotgun sequence (3713 bp)
Overview 1 RT 1: 599-3711 bp Neighborhood of RT #1 [599, 3711] L1-EN RVT-UNC Feature: gene Location: 599-952 bp Feature: gene Location: 949-1365 bp Feature: gene Location: 1391-3589 bp Feature: domain Description: L1-EN Location: 1571-2162 bp Feature: domain Description: L1-EN Location: 1571-2162 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3032-3476 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3032-3476 bp Feature: gene Location: 3562-3711 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG21/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: VOSZ01000087.1 Escherichia coli strain WU153 NODE_90_length_2320_cov_5.795363, whole genome shotgun sequence (2320 bp)
Overview 1 RT 1: 665-2089 bp Neighborhood of RT #1 [665, 2089] RVT-UNC Feature: gene Location: 665-1360 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 782-1067 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 782-1067 bp Feature: gene Location: 1370-1606 bp Feature: gene Location: 1871-2089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: VOSZ01000095.1 Escherichia coli strain WU153 NODE_98_length_2064_cov_1.949673, whole genome shotgun sequence (2064 bp)
Overview 1 RT 1: 1-1540 bp Neighborhood of RT #1 [1, 1773] RVT-CRISPR-like Feature: gene Location: 1-1773 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 898-1540 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 898-1540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR