myRT

myRT report for GCA_009362875.1_ASM936287v1

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Seq: WHOE01000035.1 Lactobacillus helveticus strain 313 NODE_18_length_28727_cov_26.029272, whole genome shotgun sequence (28727 bp)
Overview 1 RT 1: 16247-21600 bp Neighborhood of RT #1 [16247, 21626] HMA P-type_ATPase_HM P-type_ATPase_HM RVT-GII GIIM LysR PRK09564 Feature: gene Location: 16247-16477 bp Feature: domain Description: HMA Location: 16265-16451 bp Feature: domain Description: HMA Location: 1 6265-1 6451 bp Feature: gene Location: 16499-18304 bp Feature: domain Description: P-type_ATPase_HM Location: 16562-17921 bp Feature: domain Description: P-type_ATPase_HM Location: 1 6562-1 7921 bp Feature: domain Description: P-type_ATPase_HM Location: 17924-18131 bp Feature: domain Description: P-type_ATPase_HM Location: 1 7924-1 81 31 bp Feature: gene Location: 18611-19381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18614-18902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 861 4-1 8902 bp Feature: domain Description: GIIM Note: maturase Location: 18959-19166 bp Feature: domain Description: GIIM Note: maturase Location: 1 8959-1 91 66 bp Feature: gene Location: 19434-20003 bp Feature: domain Description: LysR Location: 19437-19821 bp Feature: domain Description: LysR Location: 1 9437-1 9821 bp Feature: gene Location: 20262-21626 bp Feature: domain Description: PRK09564 Location: 20277-21600 bp Feature: domain Description: PRK09564 Location: 20277-21 600 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HMA (pfam00403), P-type_ATPase_HM (cd07553), RVT-GII, GIIM (pfam08388), LysR (COG0583), PRK09564 (coenzyme A disulfide reductase; Reviewed)

Seq: WHOE01000011.1 Lactobacillus helveticus strain 313 NODE_33_length_22252_cov_36.666095, whole genome shotgun sequence (22252 bp)
Overview 1 RT 1: 3484-8353 bp Neighborhood of RT #1 [3484, 8353] SunT RVT-GII Feature: gene Location: 3484-5070 bp Feature: domain Description: SunT Location: 3526-5065 bp Feature: domain Description: SunT Location: 352 6-5065 bp Feature: gene Location: 5208-5507 bp Feature: gene Location: 5614-6501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5815-6421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5815-642 1 bp Feature: gene Location: 7822-8070 bp Feature: gene Location: 8084-8353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SunT (COG2274), RVT-GII

Seq: WHOE01000098.1 Lactobacillus helveticus strain 313 NODE_53_length_13919_cov_43.710658, whole genome shotgun sequence (13919 bp)
Overview 1 RT 1: 8163-13028 bp Neighborhood of RT #1 [8163, 13033] HTH_Tnp_4 RVT-GII GIIM DUF3284 arb arb Feature: gene Location: 8163-8651 bp Feature: domain Description: HTH_Tnp_4 Location: 8307-8454 bp Feature: domain Description: HTH_Tnp_4 Location: 83 07-8454 bp Feature: gene Location: 8726-8944 bp Feature: gene Location: 9655-10953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9856-10474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9856-10474 bp Feature: domain Description: GIIM Note: maturase Location: 10531-10738 bp Feature: domain Description: GIIM Note: maturase Location: 1053 1-1073 8 bp Feature: gene Location: 11047-11457 bp Feature: domain Description: DUF3284 Location: 11059-11380 bp Feature: domain Description: DUF3 284 Location: 11059-113 80 bp Feature: gene Location: 11552-13033 bp Feature: domain Description: arb Location: 11555-11669 bp Feature: domain Description: arb Location: 11555-11669 bp Feature: domain Description: arb Location: 11786-13028 bp Feature: domain Description: arb Location: 11786-13 028 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3284 (pfam11687), arb (PRK09593), HTH_Tnp_4 (pfam13613), RVT-GII, GIIM (pfam08388)

Seq: WHOE01000024.1 Lactobacillus helveticus strain 313 NODE_7_length_40807_cov_703.275376, whole genome shotgun sequence (40807 bp)
Overview 1 RT 1: 34476-38136 bp Neighborhood of RT #1 [34476, 38136] RVT-DGRs Feature: gene Location: 34476-35345 bp Feature: gene Location: 35454-35891 bp Feature: gene Location: 36168-37310 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 36354-37065 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 36354 -37065 bp Feature: gene Location: 37346-37894 bp Feature: gene Location: 37915-38136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs