myRT

myRT report for GCA_009377185.1_ASM937718v1

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Seq: VJZC01000014.1 Streptomyces spongiae strain NBRC 106415 NODE_13_length_54065_cov_69.605, whole genome shotgun sequence (54065 bp)
Overview 1 RT 1: 51286-54063 bp Neighborhood of RT #1 [51286, 54063] RVT-GII HTH_Tnp_4 DDE_Tnp_4 Feature: gene Location: 51286-51558 bp Feature: gene Location: 51563-52057 bp Feature: gene Location: 51814-52575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52264-52534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52264-52534 bp Feature: gene Location: 53034-53729 bp Feature: domain Description: HTH_Tnp_4 Location: 53040-53121 bp Feature: domain Description: HTH_Tnp_4 Location: 53040-531 21 bp Feature: domain Description: DDE_Tnp_4 Location: 53202-53682 bp Feature: domain Description: DDE_Tnp_4 Location: 53202-53682 bp Feature: gene Location: 53827-54063 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_Tnp_4 (pfam13613), DDE_Tnp_4 (pfam13359)

Seq: VJZC01000036.1 Streptomyces spongiae strain NBRC 106415 NODE_35_length_38634_cov_53.453, whole genome shotgun sequence (38634 bp)
Overview 1 RT 1: 1280-9862 bp Neighborhood of RT #1 [1280, 9862] TetR_N TetR_C_21 Tas RVT-GII Intron_maturas2 HNHc RVT-GII Intron_maturas2 HNHc Transposase_mut Feature: gene Location: 1280-1957 bp Feature: domain Description: TetR_N Location: 1352-1490 bp Feature: domain Description: TetR_N Location: 1352 -1490 bp Feature: domain Description: TetR_C_21 Location: 1544-1877 bp Feature: domain Description: TetR_C_2 1 Location: 1544-1877 bp Feature: gene Location: 2083-3075 bp Feature: domain Description: Tas Location: 2086-3016 bp Feature: domain Description: Tas Location: 2 086-3016 bp Feature: gene Location: 3396-4889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3402-4158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3402 -4158 bp Feature: domain Description: Intron_maturas2 Location: 4260-4494 bp Feature: domain Description: Intron_maturas2 Location: 42 60-4494 bp Feature: domain Description: HNHc Note: nucleases Location: 4659-4848 bp Feature: domain Description: HNHc Note: nucleases Location: 4659-4848 bp Feature: gene Location: 5756-7537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6017-6812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6017-6812 bp Feature: domain Description: Intron_maturas2 Location: 6914-7142 bp Feature: domain Description: Intron_maturas2 Location: 6914-7142 bp Feature: domain Description: HNHc Note: nucleases Location: 7334-7493 bp Feature: domain Description: HNHc Note: nucleases Location: 7334-7493 bp Feature: gene Location: 8033-9277 bp Feature: domain Description: Transposase_mut Location: 8069-9164 bp Feature: domain Description: Transposase_mut Location: 8069-9164 bp Feature: gene Location: 9554-9862 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TetR_N (pfam00440), TetR_C_21 (pfam17926), Tas (COG0667), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Transposase_mut (pfam00872)