myRT

myRT report for GCA_009379925.1_ASM937992v1

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Seq: WHSU01000025.1 Dehalococcoidia bacterium isolate Dino_bin15 k141_326601_length_45855_cov_19.9750, whole genome shotgun sequence (45855 bp)
Overview 1 RT 1: 26229-35824 bp Neighborhood of RT #1 [26229, 35931] INT_ICEBs1_C_like COG4683 RVT-GII GIIM Resolvase Recombinase Zn_ribbon_recom RHH_1 RVT-GII Transposase_mut COG3547 HTH_21 Feature: gene Location: 26229-27485 bp Feature: domain Description: INT_ICEBs1_C_like Location: 26778-27342 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 26778-27342 bp Feature: gene Location: 27980-28351 bp Feature: domain Description: COG4683 Location: 27983-28331 bp Feature: domain Description: COG4683 Location: 27983-28331 bp Feature: gene Location: 29413-30378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29719-29971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2971 9-29971 bp Feature: domain Description: GIIM Note: maturase Location: 30046-30262 bp Feature: domain Description: GIIM Note: maturase Location: 30046-30262 bp Feature: gene Location: 29975-31723 bp Feature: domain Description: Resolvase Location: 29987-30428 bp Feature: domain Description: Resolvase Location: 29987-30428 bp Feature: domain Description: Recombinase Location: 30515-30878 bp Feature: domain Description: Recombinase Location: 3051 5-30878 bp Feature: domain Description: Zn_ribbon_recom Location: 30917-31106 bp Feature: domain Description: Zn_ribbon_recom Location: 3091 7-31 1 06 bp Feature: gene Location: 31856-32212 bp Feature: domain Description: RHH_1 Location: 32075-32180 bp Feature: domain Description: RHH_1 Location: 32075-321 80 bp Feature: gene Location: 32284-33012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32581-32974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32581 -32974 bp Feature: gene Location: 33962-34426 bp Feature: domain Description: Transposase_mut Location: 33974-34364 bp Feature: domain Description: Transposase_mut Location: 33974-34364 bp Feature: gene Location: 34756-35931 bp Feature: domain Description: COG3547 Location: 34798-35704 bp Feature: domain Description: COG3547 Location: 34798-35704 bp Feature: domain Description: HTH_21 Location: 35746-35824 bp Feature: domain Description: HTH_21 Location: 35746-35824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG4683 (Uncharacterized protein ), RVT-GII, GIIM (pfam08388), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RHH_1 (pfam01402), Transposase_mut (pfam00872), COG3547 (Transposase )
HTH_21 (pfam13276)