myRT

myRT report for GCA_009380215.1_ASM938021v1

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Seq: WHUG01000004.1 Rugamonas sp. FT29W NODE_4_length_582201_cov_22.730469_4, whole genome shotgun sequence (582201 bp)
Overview 1 RT 1: 88793-95510 bp 2 RT 2: 308388-311045 bp Neighborhood of RT #1 [88793, 95510] ARO8 RVT_N RVT-GII GIIM HNH PRK05431 Neighborhood of RT #2 [308388, 311062] DUF4224 RVT-DGRs Avd_like DUF1566 Feature: gene Location: 88793-90244 bp Feature: domain Description: ARO8 Location: 88811-90215 bp Feature: domain Description: ARO8 Location: 8881 1 -9021 5 bp Feature: gene Location: 90410-90607 bp Feature: gene Location: 91743-93476 bp Feature: RT Description: RVT_N Location: 91833-92076 bp Feature: RT Description: RVT_N Location: 91 833-92076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92121-92769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921 21 -92769 bp Feature: domain Description: GIIM Note: maturase Location: 92820-93054 bp Feature: domain Description: GIIM Note: maturase Location: 92820-93054 bp Feature: domain Description: HNH Note: nucleases Location: 93306-93441 bp Feature: domain Description: HNH Note: nucleases Location: 93306-93441 bp Feature: gene Location: 93591-94880 bp Feature: domain Description: PRK05431 Location: 93594-94875 bp Feature: domain Description: PRK05431 Location: 93594-94875 bp Feature: gene Location: 95349-95510 bp Feature: gene Location: 308388-308615 bp Feature: domain Description: DUF4224 Location: 308403-308535 bp Feature: domain Description: DUF4224 Location: 308403-308535 bp Feature: gene Location: 308650-308979 bp Feature: gene Location: 308882-310321 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 309398-310085 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 309398-31 0085 bp Feature: gene Location: 310285-310641 bp Feature: domain Description: Avd_like Location: 310312-310618 bp Feature: domain Description: Avd_like Location: 31 031 2-31 061 8 bp Feature: gene Location: 310655-311062 bp Feature: domain Description: DUF1566 Location: 310811-311045 bp Feature: domain Description: DUF1 566 Location: 31 081 1 -31 1 045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ARO8 (COG1167), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PRK05431 (seryl-tRNA synthetase; Provisional), DUF4224 (pfam13986), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)