myRT

myRT report for GCA_009389055.1_ASM938905v1

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Seq: QKPS01000016.1 Lactobacillus reuteri strain PTA6_F4 NODE_16_length_48671_cov_133.257, whole genome shotgun sequence (48671 bp)
Overview 1 RT 1: 3-3422 bp Neighborhood of RT #1 [3, 3451] RVT-GII GIIM EAL PgaC_IcaA Feature: gene Location: 3-1259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195-813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 95-81 3 bp Feature: domain Description: GIIM Note: maturase Location: 867-1095 bp Feature: domain Description: GIIM Note: maturase Location: 867-1 095 bp Feature: gene Location: 1324-2133 bp Feature: domain Description: EAL Location: 1477-2104 bp Feature: domain Description: EAL Location: 1 477-21 04 bp Feature: gene Location: 2120-3451 bp Feature: domain Description: PgaC_IcaA Location: 2198-3422 bp Feature: domain Description: PgaC_IcaA Location: 21 98-3422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), EAL (smart00052), PgaC_IcaA (TIGR03937)

Seq: QKPS01000006.1 Lactobacillus reuteri strain PTA6_F4 NODE_6_length_77677_cov_109.802, whole genome shotgun sequence (77677 bp)
Overview 1 RT 1: 12464-15568 bp Neighborhood of RT #1 [12464, 15568] RAYT RVT-GII GIIM Feature: gene Location: 12464-12688 bp Feature: domain Description: RAYT Location: 12467-12629 bp Feature: domain Description: RAYT Location: 12 467-12 62 9 bp Feature: gene Location: 12857-13189 bp Feature: gene Location: 13491-13892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13494-13686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13494-13686 bp Feature: domain Description: GIIM Note: maturase Location: 13743-13890 bp Feature: domain Description: GIIM Note: maturase Location: 13743-13890 bp Feature: gene Location: 13977-14135 bp Feature: gene Location: 15422-15568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAYT (COG1943), RVT-GII, GIIM (pfam08388)