myRT

myRT report for GCA_009391925.1_ASM939192v1

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Seq: WHVM01000005.1 Pseudomonas aeruginosa strain UM5686 NODE_5_length_213132_cov_5.498106, whole genome shotgun sequence (213132 bp)
Overview 1 RT 1: 7615-18285 bp Neighborhood of RT #1 [7615, 18350] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 NERD Feature: gene Location: 7615-9468 bp Feature: domain Description: PRK05658 Location: 7627-9466 bp Feature: domain Description: PRK05658 Location: 7627-9466 bp Feature: gene Location: 9575-13312 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 9683-10340 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 9683-1 0340 bp Feature: domain Description: PRK09776 Location: 10553-11024 bp Feature: domain Description: PRK09776 Location: 1 0553-1 1 024 bp Feature: domain Description: PAS Location: 11069-11606 bp Feature: domain Description: PAS Location: 1 1 069-1 1 606 bp Feature: domain Description: PRK10060 Location: 11615-13262 bp Feature: domain Description: PRK1 0060 Location: 1 1 61 5-1 3262 bp Feature: gene Location: 14393-16078 bp Feature: RT Description: RVT_N Location: 14450-14690 bp Feature: RT Description: RVT_N Location: 1 4450-1 4690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14738-15374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4738-1 5374 bp Feature: domain Description: GIIM Note: maturase Location: 15428-15659 bp Feature: domain Description: GIIM Note: maturase Location: 1 5428-1 5659 bp Feature: domain Description: HNH Note: nucleases Location: 15911-16049 bp Feature: domain Description: HNH Note: nucleases Location: 1 591 1 -1 6049 bp Feature: gene Location: 16801-17922 bp Feature: domain Description: COG3177 Location: 16819-17911 bp Feature: domain Description: COG31 77 Location: 1 681 9-1 791 1 bp Feature: gene Location: 18015-18350 bp Feature: domain Description: NERD Location: 18114-18285 bp Feature: domain Description: NERD Location: 1 81 1 4-1 8285 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3177 (Fic family protein ), NERD (pfam08378), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091)
PRK10060 (cyclic di-GMP phosphodiesterase)