myRT

myRT report for GCA_009393335.1_ASM939333v1

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Seq: RYAC01000121.1 Escherichia coli strain L001p NODE_121_length_1022_cov_1.91173, whole genome shotgun sequence (1022 bp)
Overview 1 RT 1: 2-696 bp Neighborhood of RT #1 [2, 696] RVT-Retrons Feature: gene Location: 2-247 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 146-248 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 46-248 bp Feature: gene Location: 269-451 bp Feature: gene Location: 541-696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: RYAC01000020.1 Escherichia coli strain L001p NODE_20_length_76247_cov_120.148, whole genome shotgun sequence (76247 bp)
Overview 1 RT 1: 65925-70635 bp Neighborhood of RT #1 [65925, 71525] Q RVT-AbiP2 Phage_GPA Feature: gene Location: 65925-66959 bp Feature: domain Description: Q Location: 65928-66954 bp Feature: domain Description: Q Location: 6592 8-66954 bp Feature: gene Location: 67008-67160 bp Feature: gene Location: 67355-68899 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 67772-68225 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 67772 -682 2 5 bp Feature: gene Location: 69065-69325 bp Feature: gene Location: 69387-71525 bp Feature: domain Description: Phage_GPA Location: 69648-70635 bp Feature: domain Description: Phage_GPA Location: 69648-70635 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-AbiP2, Phage_GPA (pfam05840)

Seq: RYAC01000090.1 Escherichia coli strain L001p NODE_90_length_2271_cov_548.41, whole genome shotgun sequence (2271 bp)
Overview 1 RT 1: 92-2268 bp Neighborhood of RT #1 [92, 2268] RVT-GII GIIM Feature: gene Location: 92-1615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 65-1097 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1370 bp Feature: domain Description: GIIM Note: maturase Location: 1172-13 70 bp Feature: gene Location: 1909-2268 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)