myRT

myRT report for GCA_009393835.1_ASM939383v1

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Seq: RYBT01000001.1 Escherichia coli strain B062h NODE_1_length_297377_cov_28.4456, whole genome shotgun sequence (297377 bp)
Overview 1 RT 1: 96416-102127 bp Neighborhood of RT #1 [96416, 102132] RVT-Retrons Q P Feature: gene Location: 96416-96841 bp Feature: gene Location: 97245-98198 bp Feature: gene Location: 98361-99323 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 98538-99081 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 98538-99081 bp Feature: gene Location: 99341-100366 bp Feature: domain Description: Q Location: 99344-100364 bp Feature: domain Description: Q Location: 99344-1 00364 bp Feature: gene Location: 100366-102132 bp Feature: domain Description: P Location: 100393-102127 bp Feature: domain Description: P Location: 1 00393-1 021 27 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), RVT-Retrons, Q (PHA02536)

Seq: RYBT01000059.1 Escherichia coli strain B062h NODE_59_length_14098_cov_56.1248, whole genome shotgun sequence (14098 bp)
Overview 1 RT 1: 385-3701 bp Neighborhood of RT #1 [385, 3766] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 385-603 bp Feature: gene Location: 807-1253 bp Feature: domain Description: PHA02517 Location: 810-1251 bp Feature: domain Description: PHA02 517 Location: 810-12 51 bp Feature: gene Location: 1370-2893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1643-2375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1643-2 375 bp Feature: domain Description: GIIM Note: maturase Location: 2450-2648 bp Feature: domain Description: GIIM Note: maturase Location: 2 450-2 648 bp Feature: gene Location: 2847-3272 bp Feature: gene Location: 3485-3766 bp Feature: domain Description: PHA02517 Location: 3491-3701 bp Feature: domain Description: PHA02 517 Location: 3491-3701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)