myRT

myRT report for GCA_009393965.1_ASM939396v1

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Seq: RYBZ01000001.1 Escherichia coli strain E009f NODE_1_length_303945_cov_123.037, whole genome shotgun sequence (303945 bp)
Overview 1 RT 1: 133275-139837 bp Neighborhood of RT #1 [133275, 139845] DUF5405 Phage_GPA RVT-Retrons ABC_ATPase Q Feature: gene Location: 133275-133550 bp Feature: domain Description: DUF5405 Location: 133293-133533 bp Feature: domain Description: DUF5405 Location: 1 33293-1 33533 bp Feature: gene Location: 133540-135810 bp Feature: domain Description: Phage_GPA Location: 133939-134926 bp Feature: domain Description: Phage_GPA Location: 1 33939-1 34926 bp Feature: gene Location: 136137-137126 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 136254-136815 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 36254-1 3681 5 bp Feature: gene Location: 137128-138480 bp Feature: domain Description: ABC_ATPase Location: 137188-137911 bp Feature: domain Description: ABC_ATPase Location: 1 371 88-1 3791 1 bp Feature: gene Location: 138811-139845 bp Feature: domain Description: Q Location: 138814-139837 bp Feature: domain Description: Q Location: 1 3881 4-1 39837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5405 (pfam17399), Phage_GPA (pfam05840), RVT-Retrons, ABC_ATPase (pfam09818), Q (PHA02536)

Seq: RYBZ01000074.1 Escherichia coli strain E009f NODE_74_length_10085_cov_219.046, whole genome shotgun sequence (10085 bp)
Overview 1 RT 1: 4772-10084 bp Neighborhood of RT #1 [4772, 10083] RVT-GII GIIM RAYT PRK11447 Feature: gene Location: 4772-4909 bp Feature: gene Location: 4999-5268 bp Feature: gene Location: 5293-6639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5581-6199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5581-6199 bp Feature: domain Description: GIIM Note: maturase Location: 6247-6478 bp Feature: domain Description: GIIM Note: maturase Location: 62 47-6478 bp Feature: gene Location: 6795-7334 bp Feature: domain Description: RAYT Location: 6873-7236 bp Feature: domain Description: RAYT Location: 6873-72 36 bp Feature: gene Location: 7681-10083 bp Feature: domain Description: PRK11447 Location: 7684-10084 bp Feature: domain Description: PRK11447 Location: 7684-10084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RAYT (COG1943), PRK11447 (cellulose synthase subunit BcsC; Provisional)