myRT

myRT report for GCA_009394225.1_ASM939422v1

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Seq: RYCN01000083.1 Escherichia coli strain B024ch NODE_83_length_7938_cov_290.41, whole genome shotgun sequence (7938 bp)
Overview 1 RT 1: 4949-7411 bp Neighborhood of RT #1 [4949, 7509] RVT-GII GIIM RAYT Feature: gene Location: 4949-5086 bp Feature: gene Location: 5176-5445 bp Feature: gene Location: 5470-6816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5758-6376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5758-6376 bp Feature: domain Description: GIIM Note: maturase Location: 6424-6655 bp Feature: domain Description: GIIM Note: maturase Location: 6424-6655 bp Feature: gene Location: 6970-7509 bp Feature: domain Description: RAYT Location: 7048-7411 bp Feature: domain Description: RAYT Location: 7048-741 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RAYT (COG1943)

Seq: RYCN01000088.1 Escherichia coli strain B024ch NODE_88_length_5997_cov_108.561, whole genome shotgun sequence (5997 bp)
Overview 1 RT 1: 1018-5179 bp Neighborhood of RT #1 [1018, 5181] InsE PHA02517 RVT-GII GIIM PHA02517 PHA02517 Feature: gene Location: 1018-1344 bp Feature: domain Description: InsE Location: 1021-1342 bp Feature: domain Description: InsE Location: 102 1-1342 bp Feature: gene Location: 1341-1823 bp Feature: domain Description: PHA02517 Location: 1404-1758 bp Feature: domain Description: PHA02 517 Location: 1404-1758 bp Feature: gene Location: 2415-3938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2688-3420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 688-342 0 bp Feature: domain Description: GIIM Note: maturase Location: 3495-3693 bp Feature: domain Description: GIIM Note: maturase Location: 3495-3693 bp Feature: gene Location: 4115-4501 bp Feature: domain Description: PHA02517 Location: 4118-4499 bp Feature: domain Description: PHA02 517 Location: 4118-4499 bp Feature: gene Location: 4597-5181 bp Feature: domain Description: PHA02517 Location: 4657-5179 bp Feature: domain Description: PHA02 517 Location: 4657-5179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: RYCN01000098.1 Escherichia coli strain B024ch NODE_98_length_3890_cov_132.665, whole genome shotgun sequence (3890 bp)
Overview 1 RT 1: 3-3879 bp Neighborhood of RT #1 [3, 3887] RVT-Retrons ABC_ATPase Q Feature: gene Location: 3-560 bp Feature: gene Location: 572-706 bp Feature: gene Location: 887-1876 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1004-1565 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1004-1565 bp Feature: gene Location: 1878-3230 bp Feature: domain Description: ABC_ATPase Location: 1938-2661 bp Feature: domain Description: ABC_ATPase Location: 193 8-2661 bp Feature: gene Location: 3561-3887 bp Feature: domain Description: Q Location: 3564-3879 bp Feature: domain Description: Q Location: 3 564-3 879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_ATPase (pfam09818), Q (PHA02536), RVT-Retrons