myRT

myRT report for GCA_009467825.1_ASM946782v1

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Seq: WIOK01000050.1 Cyclobacterium xiamenense strain CGMCC 1.12432 NODE_50_length_25073_cov_256.248338, whole genome shotgun sequence (25073 bp)
Overview 1 RT 1: 10314-15263 bp Neighborhood of RT #1 [10314, 15274] HTH_XRE RVT-UG28b VirE_N PriCT_2 HTH_ARAC Feature: gene Location: 10314-10514 bp Feature: domain Description: HTH_XRE Location: 10323-10488 bp Feature: domain Description: HTH_XRE Location: 1 0323-1 0488 bp Feature: gene Location: 10527-10694 bp Feature: gene Location: 11002-12999 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 11464-12214 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 1 1 464-1 221 4 bp Feature: gene Location: 13140-14153 bp Feature: domain Description: VirE_N Location: 13323-13695 bp Feature: domain Description: VirE_N Location: 1 3323-1 3695 bp Feature: domain Description: PriCT_2 Location: 13878-14106 bp Feature: domain Description: PriCT_2 Location: 1 3878-1 41 06 bp Feature: gene Location: 14372-15274 bp Feature: domain Description: HTH_ARAC Location: 15017-15263 bp Feature: domain Description: HTH_ARAC Location: 1 501 7-1 5263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-UG28b, VirE_N (pfam08800), PriCT_2 (pfam08707), HTH_ARAC (smart00342)

Seq: WIOK01000055.1 Cyclobacterium xiamenense strain CGMCC 1.12432 NODE_55_length_16389_cov_223.706446, whole genome shotgun sequence (16389 bp)
Overview 1 RT 1: 13990-16094 bp Neighborhood of RT #1 [13990, 16099] Asp_Arg_Hydrox RVT-GII PIN_VapC-like Feature: gene Location: 13990-14607 bp Feature: domain Description: Asp_Arg_Hydrox Location: 14200-14527 bp Feature: domain Description: Asp_Arg_Hydrox Location: 142 00-1452 7 bp Feature: gene Location: 14671-14997 bp Feature: gene Location: 15023-15325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15026-15209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1502 6-152 09 bp Feature: gene Location: 15347-15535 bp Feature: gene Location: 15728-16099 bp Feature: domain Description: PIN_VapC-like Location: 15740-16094 bp Feature: domain Description: PIN_VapC-like Location: 15740-16094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asp_Arg_Hydrox (pfam05118), RVT-GII, PIN_VapC-like (cd18715)