myRT

myRT report for GCA_009493895.1_ASM949389v1

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Seq: VZCW01000129.1 Prevotella copri strain iAQ1179 NODE_298_length_2492_cov_9.28231_ID_705, whole genome shotgun sequence (2492 bp)
Overview 1 RT 1: 124-1483 bp Neighborhood of RT #1 [124, 1860] RVT_N RVT-GII YkfC Feature: gene Location: 124-1860 bp Feature: domain Description: RVT_N Location: 247-490 bp Feature: domain Description: RVT_N Location: 247-490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 535-1183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 535-1 1 83 bp Feature: domain Description: YkfC Location: 1393-1483 bp Feature: domain Description: YkfC Location: 1 393-1 483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: VZCW01000193.1 Prevotella copri strain iAQ1179 NODE_299_length_2453_cov_7.57965_ID_707, whole genome shotgun sequence (2453 bp)
Overview 1 RT 1: 230-2450 bp Neighborhood of RT #1 [230, 2450] RVT-UG28b Feature: gene Location: 230-1054 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 260-485 bp Feature: RT Description: RVT-UG2 8b Note: UG2 8b RT Location: 2 60-485 bp Feature: gene Location: 1280-2017 bp Feature: gene Location: 2205-2450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28b

Seq: VZCW01000296.1 Prevotella copri strain iAQ1179 NODE_333_length_1935_cov_34.8447_ID_759, whole genome shotgun sequence (1935 bp)
Overview 1 RT 1: 1-1654 bp Neighborhood of RT #1 [1, 1833] RVT-GII GIIM Feature: gene Location: 1-198 bp Feature: gene Location: 430-1833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772-1390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772-13 90 bp Feature: domain Description: GIIM Note: maturase Location: 1444-1654 bp Feature: domain Description: GIIM Note: maturase Location: 1444-1654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VZCW01000343.1 Prevotella copri strain iAQ1179 NODE_44_length_22473_cov_3.40186_ID_47, whole genome shotgun sequence (22473 bp)
Overview 1 RT 1: 16796-22470 bp Neighborhood of RT #1 [16796, 22470] RVT-DGRs Feature: gene Location: 16796-18175 bp Feature: gene Location: 18481-18627 bp Feature: gene Location: 18696-20120 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 18900-19503 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 18900-19503 bp Feature: gene Location: 20117-20569 bp Feature: gene Location: 20587-22470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs