myRT

myRT report for GCA_009493905.1_ASM949390v1

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Seq: VZDA01000084.1 Prevotella copri strain iK21614 NODE_107_length_1815_cov_398.478_ID_213, whole genome shotgun sequence (1815 bp)
Overview 1 RT 1: 58-1282 bp Neighborhood of RT #1 [58, 1461] RVT-GII GIIM Feature: gene Location: 58-1461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1 01 8 bp Feature: domain Description: GIIM Note: maturase Location: 1072-1282 bp Feature: domain Description: GIIM Note: maturase Location: 1 072-1 282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VZDA01000038.1 Prevotella copri strain iK21614 NODE_13_length_71234_cov_14.9993_ID_25, whole genome shotgun sequence (71233 bp)
Overview 1 RT 1: 35908-38843 bp Neighborhood of RT #1 [35908, 38843] RVT-UG27 DpnD-PcfM Feature: gene Location: 35908-36234 bp Feature: gene Location: 36391-36594 bp Feature: gene Location: 36718-37983 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 36910-37543 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 36910-37543 bp Feature: gene Location: 38244-38474 bp Feature: domain Description: DpnD-PcfM Location: 38256-38385 bp Feature: domain Description: DpnD-PcfM Location: 382 56-38385 bp Feature: gene Location: 38523-38843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27, DpnD-PcfM (pfam14207)

Seq: VZDA01000076.1 Prevotella copri strain iK21614 NODE_16_length_64901_cov_30.3585_ID_31, whole genome shotgun sequence (64901 bp)
Overview 1 RT 1: 10370-15563 bp Neighborhood of RT #1 [10370, 15563] RVT-DGRs Feature: gene Location: 10370-10759 bp Feature: gene Location: 10760-11569 bp Feature: gene Location: 11632-12366 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11836-12340 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1183 6-123 40 bp Feature: gene Location: 12924-14348 bp Feature: gene Location: 14355-15563 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs