myRT

myRT report for GCA_009494045.1_ASM949404v1

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Seq: VZCT01000041.1 Prevotella copri strain iAQ1149 NODE_114_length_2188_cov_11.2077_ID_231, whole genome shotgun sequence (2188 bp)
Overview 1 RT 1: 129-1989 bp Neighborhood of RT #1 [129, 1989] RVT_N RVT-GII GIIM Feature: gene Location: 129-1625 bp Feature: RT Description: RVT_N Location: 195-438 bp Feature: RT Description: RVT_N Location: 1 95-438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483-1125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483-1 1 25 bp Feature: domain Description: GIIM Note: maturase Location: 1182-1413 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 82-1 41 3 bp Feature: gene Location: 1687-1989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: VZCT01000046.1 Prevotella copri strain iAQ1149 NODE_121_length_1745_cov_5.27811_ID_243, whole genome shotgun sequence (1745 bp)
Overview 1 RT 1: 117-1739 bp Neighborhood of RT #1 [117, 1739] RVT-GII GIIM Feature: gene Location: 117-1523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459-1077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459-1077 bp Feature: domain Description: GIIM Note: maturase Location: 1131-1344 bp Feature: domain Description: GIIM Note: maturase Location: 1131-1344 bp Feature: gene Location: 1569-1739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VZCT01000066.1 Prevotella copri strain iAQ1149 NODE_20_length_57761_cov_6.0139_ID_49, whole genome shotgun sequence (57761 bp)
Overview 1 RT 1: 9328-14088 bp Neighborhood of RT #1 [9328, 14088] RVT-DGRs Feature: gene Location: 9328-10446 bp Feature: gene Location: 10466-10891 bp Feature: gene Location: 10912-12393 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11128-11839 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11128-1183 9 bp Feature: gene Location: 12613-12747 bp Feature: gene Location: 12820-14088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VZCT01000065.1 Prevotella copri strain iAQ1149 NODE_22_length_56924_cov_5.61534_ID_53, whole genome shotgun sequence (56924 bp)
Overview 1 RT 1: 38664-46669 bp Neighborhood of RT #1 [38664, 46683] PRK04523 proA RVT-GII GIIM KefB Na_H_Antiporter_C SDF Feature: gene Location: 38664-39626 bp Feature: domain Description: PRK04523 Location: 38667-39612 bp Feature: domain Description: PRK04 523 Location: 38667-39612 bp Feature: gene Location: 39684-40970 bp Feature: domain Description: proA Location: 39690-40968 bp Feature: domain Description: proA Location: 39690-4 0968 bp Feature: gene Location: 41591-42997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41933-42551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 1933-4 2551 bp Feature: domain Description: GIIM Note: maturase Location: 42605-42812 bp Feature: domain Description: GIIM Note: maturase Location: 4 2605-4 2812 bp Feature: gene Location: 43105-45234 bp Feature: domain Description: KefB Location: 43147-44290 bp Feature: domain Description: KefB Location: 4 314 7-4 4 290 bp Feature: domain Description: Na_H_Antiporter_C Location: 44353-44698 bp Feature: domain Description: Na_H_Antiporter_C Location: 4 4 353-4 4 698 bp Feature: gene Location: 45400-46683 bp Feature: domain Description: SDF Location: 45508-46669 bp Feature: domain Description: SDF Location: 4 5508-4 6669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK04523 (N-acetylornithine carbamoyltransferase; Reviewed), proA (TIGR00407), RVT-GII, GIIM (pfam08388), KefB (COG0475), Na_H_Antiporter_C (cd01988), SDF (pfam00375)

Seq: VZCT01000012.1 Prevotella copri strain iAQ1149 NODE_33_length_46210_cov_5.89321_ID_71, whole genome shotgun sequence (46210 bp)
Overview 1 RT 1: 3-3284 bp Neighborhood of RT #1 [3, 3346] RVT-GII GIIM DUF1016_N YhcG_C Lipocalin_4 Feature: gene Location: 3-1298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 234-852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 234-85 2 bp Feature: domain Description: GIIM Note: maturase Location: 906-1116 bp Feature: domain Description: GIIM Note: maturase Location: 906-1116 bp Feature: gene Location: 1436-2593 bp Feature: domain Description: DUF1016_N Location: 1493-1994 bp Feature: domain Description: DUF1016_N Location: 1493-1994 bp Feature: domain Description: YhcG_C Location: 2075-2537 bp Feature: domain Description: YhcG_C Location: 2075 -25 37 bp Feature: gene Location: 2876-3346 bp Feature: domain Description: Lipocalin_4 Location: 2999-3284 bp Feature: domain Description: Lipocalin_4 Location: 2999-3284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1016_N (pfam17761), YhcG_C, Lipocalin_4 (pfam13648), RVT-GII, GIIM (pfam08388)