myRT

myRT report for GCA_009494375.1_ASM949437v1

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Seq: VZCD01000035.1 Prevotella copri strain iAA615 NODE_143_length_1898_cov_982.865_ID_285, whole genome shotgun sequence (1898 bp)
Overview 1 RT 1: 2-1727 bp Neighborhood of RT #1 [2, 1828] RVT-GII GIIM Feature: gene Location: 2-253 bp Feature: gene Location: 566-1828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 770-1427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 770-1 427 bp Feature: domain Description: GIIM Note: maturase Location: 1511-1727 bp Feature: domain Description: GIIM Note: maturase Location: 1 51 1 -1 727 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VZCD01000027.1 Prevotella copri strain iAA615 NODE_144_length_1879_cov_1017.5_ID_287, whole genome shotgun sequence (1879 bp)
Overview 1 RT 1: 103-1327 bp Neighborhood of RT #1 [103, 1506] RVT-GII GIIM Feature: gene Location: 103-1506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1063 bp Feature: domain Description: GIIM Note: maturase Location: 1117-1327 bp Feature: domain Description: GIIM Note: maturase Location: 1117-132 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VZCD01000093.1 Prevotella copri strain iAA615 NODE_5_length_123162_cov_109.837_ID_9, whole genome shotgun sequence (123162 bp)
Overview 1 RT 1: 47949-52310 bp Neighborhood of RT #1 [47949, 52310] RVT-DGRs RVT-DGRs Feature: gene Location: 47949-49421 bp Feature: gene Location: 49437-49667 bp Feature: gene Location: 49994-51595 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50201-50714 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50201-50714 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50738-50942 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5073 8-50942 bp Feature: gene Location: 51599-51988 bp Feature: gene Location: 52074-52310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VZCD01000086.1 Prevotella copri strain iAA615 NODE_66_length_15501_cov_71.4552_ID_131, whole genome shotgun sequence (15501 bp)
Overview 1 RT 1: 244-8036 bp Neighborhood of RT #1 [244, 8542] RVT-GII YkfC RVT_N RVT-GII COG4646 N6_Mtase Feature: gene Location: 244-1446 bp Feature: gene Location: 1400-2518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1403-1841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 03-184 1 bp Feature: domain Description: YkfC Location: 2051-2141 bp Feature: domain Description: YkfC Location: 2051-214 1 bp Feature: gene Location: 2525-3136 bp Feature: RT Description: RVT_N Location: 2648-2891 bp Feature: RT Description: RVT_N Location: 264 8-2891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2936-3122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2936-3122 bp Feature: gene Location: 3742-7005 bp Feature: domain Description: COG4646 Location: 4558-6625 bp Feature: domain Description: COG4 64 6 Location: 4 558-6625 bp Feature: gene Location: 7016-8542 bp Feature: domain Description: N6_Mtase Location: 7328-8036 bp Feature: domain Description: N6_Mtase Location: 7328-8036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YkfC (COG3344), RVT_N (pfam13655), COG4646 (Adenine-specific DNA methylase, N12 class ), N6_Mtase (pfam02384)