myRT

myRT report for GCA_009494435.1_ASM949443v1

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Seq: VZBY01000001.1 Prevotella copri strain BVe41210 NODE_37_length_30091_cov_44.0445_ID_73, whole genome shotgun sequence (30091 bp)
Overview 1 RT 1: 11061-16211 bp 2 RT 2: 25500-29976 bp Neighborhood of RT #1 [11061, 16231] FldA NapF RVT-GII LysR YeiH Neighborhood of RT #2 [25500, 29976] WG_beta_rep RVT-GII GIIM Feature: gene Location: 11061-11498 bp Feature: gene Location: 11503-12297 bp Feature: domain Description: FldA Location: 11512-11788 bp Feature: domain Description: FldA Location: 1 1 51 2-1 1 788 bp Feature: domain Description: NapF Location: 12016-12238 bp Feature: domain Description: NapF Location: 1 201 6-1 2238 bp Feature: gene Location: 12958-14037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13162-13819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 62-1 381 9 bp Feature: gene Location: 14122-15099 bp Feature: domain Description: LysR Location: 14221-15061 bp Feature: domain Description: LysR Location: 1 4221 -1 5061 bp Feature: gene Location: 15185-16231 bp Feature: domain Description: YeiH Location: 15203-16211 bp Feature: domain Description: YeiH Location: 1 5203-1 621 1 bp Feature: gene Location: 25500-26933 bp Feature: gene Location: 27261-27479 bp Feature: domain Description: WG_beta_rep Location: 27360-27444 bp Feature: domain Description: WG_beta_rep Location: 27360-27444 bp Feature: gene Location: 28077-29483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28419-29037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2841 9-29037 bp Feature: domain Description: GIIM Note: maturase Location: 29091-29301 bp Feature: domain Description: GIIM Note: maturase Location: 29091 -29301 bp Feature: gene Location: 29836-29976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FldA (COG0716), NapF (COG1145), RVT-GII, LysR (COG0583), YeiH (COG2855), WG_beta_rep (pfam14903), GIIM (pfam08388)

Seq: VZBY01000064.1 Prevotella copri strain BVe41210 NODE_4_length_201377_cov_25.6957_ID_7, whole genome shotgun sequence (201377 bp)
Overview 1 RT 1: 131288-142970 bp Neighborhood of RT #1 [131288, 142975] RVT-DGRs Gph Feature: gene Location: 131288-132136 bp Feature: gene Location: 132140-140467 bp Feature: gene Location: 140864-142165 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 141074-141668 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 141074-141668 bp Feature: gene Location: 142211-142687 bp Feature: gene Location: 142823-142975 bp Feature: domain Description: Gph Location: 142829-142970 bp Feature: domain Description: Gph Location: 142 82 9-142 970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Gph (COG0546)

Seq: VZBY01000052.1 Prevotella copri strain BVe41210 NODE_5_length_200473_cov_25.6797_ID_9, whole genome shotgun sequence (200472 bp)
Overview 1 RT 1: 86024-91165 bp Neighborhood of RT #1 [86024, 91165] RVT-DGRs RVT-DGRs Feature: gene Location: 86024-87232 bp Feature: gene Location: 87239-88696 bp Feature: gene Location: 88827-90434 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 89031-89541 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8903 1-89541 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 89577-89781 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 89577-89781 bp Feature: gene Location: 90435-90824 bp Feature: gene Location: 90887-91165 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VZBY01000054.1 Prevotella copri strain BVe41210 NODE_71_length_1732_cov_129.15_ID_141, whole genome shotgun sequence (1732 bp)
Overview 1 RT 1: 5-1448 bp Neighborhood of RT #1 [5, 1627] RVT-GII GIIM Feature: gene Location: 5-175 bp Feature: gene Location: 221-1627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 566-1181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 566-1181 bp Feature: domain Description: GIIM Note: maturase Location: 1235-1448 bp Feature: domain Description: GIIM Note: maturase Location: 1235-14 4 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)