myRT

myRT report for GCA_009494455.1_ASM949445v1

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Seq: VZBZ01000164.1 Prevotella copri strain BU41712 NODE_12_length_66232_cov_6.23153_ID_23, whole genome shotgun sequence (66232 bp)
Overview 1 RT 1: 4012-7544 bp Neighborhood of RT #1 [4012, 7561] PHA00447 RVT-DGRs Avd_like DUF1566 Feature: gene Location: 4012-4425 bp Feature: domain Description: PHA00447 Location: 4021-4405 bp Feature: domain Description: PHA00447 Location: 4021 -4405 bp Feature: gene Location: 4427-4783 bp Feature: gene Location: 4891-6075 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5074-5767 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5074-5767 bp Feature: gene Location: 6287-6703 bp Feature: domain Description: Avd_like Location: 6320-6638 bp Feature: domain Description: Avd_like Location: 6320-6638 bp Feature: gene Location: 6779-7561 bp Feature: domain Description: DUF1566 Location: 7151-7544 bp Feature: domain Description: DUF1 566 Location: 71 51 -7544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00447 (lysozyme), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: VZBZ01000065.1 Prevotella copri strain BU41712 NODE_146_length_1934_cov_90.2443_ID_291, whole genome shotgun sequence (1934 bp)
Overview 1 RT 1: 1-1654 bp Neighborhood of RT #1 [1, 1833] RVT-GII GIIM Feature: gene Location: 1-198 bp Feature: gene Location: 430-1833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772-1390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772 -1390 bp Feature: domain Description: GIIM Note: maturase Location: 1444-1654 bp Feature: domain Description: GIIM Note: maturase Location: 1444-1654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VZBZ01000037.1 Prevotella copri strain BU41712 NODE_184_length_1073_cov_12.4519_ID_367, whole genome shotgun sequence (1073 bp)
Overview 1 RT 1: 1-1042 bp Neighborhood of RT #1 [1, 1071] RVT-DGRs Feature: gene Location: 1-282 bp Feature: gene Location: 322-1071 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 532-1042 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53 2-1042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VZBZ01000033.1 Prevotella copri strain BU41712 NODE_76_length_14717_cov_5.50839_ID_151, whole genome shotgun sequence (14717 bp)
Overview 1 RT 1: 1720-7235 bp Neighborhood of RT #1 [1720, 7696] DUF4133 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF4141 Feature: gene Location: 1720-2046 bp Feature: domain Description: DUF4133 Location: 1738-2005 bp Feature: domain Description: DUF4 133 Location: 1738-2005 bp Feature: gene Location: 2043-3980 bp Feature: domain Description: Bac_Flav_CT_G Location: 2046-3963 bp Feature: domain Description: Bac_Flav_CT_G Location: 204 6-3963 bp Feature: gene Location: 4530-6341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4794-5616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 794 -5616 bp Feature: domain Description: Intron_maturas2 Location: 5685-6042 bp Feature: domain Description: Intron_maturas2 Location: 5685-604 2 bp Feature: domain Description: HNHc Note: nucleases Location: 6165-6312 bp Feature: domain Description: HNHc Note: nucleases Location: 6165-6312 bp Feature: gene Location: 6401-7036 bp Feature: domain Description: Bac_Flav_CT_G Location: 6452-7022 bp Feature: domain Description: Bac_Flav_CT_G Location: 64 52-7022 bp Feature: gene Location: 7067-7696 bp Feature: domain Description: DUF4141 Location: 7082-7235 bp Feature: domain Description: DUF4 14 1 Location: 7082-7235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4141 (pfam13605)

Seq: VZBZ01000087.1 Prevotella copri strain BU41712 NODE_78_length_13893_cov_6.89948_ID_155, whole genome shotgun sequence (13893 bp)
Overview 1 RT 1: 8684-11998 bp Neighborhood of RT #1 [8684, 11998] Avd_like RVT-DGRs DUF5106 Thioredoxin_8 Feature: gene Location: 8684-9076 bp Feature: domain Description: Avd_like Location: 8711-9020 bp Feature: domain Description: Avd_like Location: 8711-9020 bp Feature: gene Location: 9313-9543 bp Feature: gene Location: 9542-10801 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9752-10472 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 975 2-10472 bp Feature: gene Location: 10816-11670 bp Feature: domain Description: DUF5106 Location: 10912-11248 bp Feature: domain Description: DUF5 106 Location: 10912-11248 bp Feature: domain Description: Thioredoxin_8 Location: 11332-11608 bp Feature: domain Description: Thioredoxin_8 Location: 11332-11608 bp Feature: gene Location: 11828-11998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5106 (pfam17127), Thioredoxin_8 (pfam13905), Avd_like (cd16376), RVT-DGRs