myRT

myRT report for GCA_009494595.1_ASM949459v1

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Seq: VZBQ01000127.1 Prevotella copri strain iP54 NODE_118_length_2503_cov_180.064_ID_235, whole genome shotgun sequence (2503 bp)
Overview 1 RT 1: 581-2045 bp Neighborhood of RT #1 [581, 2383] RVT-GII Intron_maturas2 Feature: gene Location: 581-2383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 845-1667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 845-1 667 bp Feature: domain Description: Intron_maturas2 Location: 1826-2045 bp Feature: domain Description: Intron_maturas2 Location: 1 826-2045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: VZBQ01000022.1 Prevotella copri strain iP54 NODE_119_length_2492_cov_167.262_ID_237, whole genome shotgun sequence (2492 bp)
Overview 1 RT 1: 127-1486 bp Neighborhood of RT #1 [127, 1863] RVT_N RVT-GII YkfC Feature: gene Location: 127-1863 bp Feature: RT Description: RVT_N Location: 250-493 bp Feature: RT Description: RVT_N Location: 2 50-493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538-1186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538-1186 bp Feature: domain Description: YkfC Location: 1396-1486 bp Feature: domain Description: YkfC Location: 1396-1486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: VZBQ01000011.1 Prevotella copri strain iP54 NODE_12_length_85846_cov_110.578_ID_23, whole genome shotgun sequence (85846 bp)
Overview 1 RT 1: 37160-45388 bp Neighborhood of RT #1 [37160, 45388] RVT-DGRs Feature: gene Location: 37160-41518 bp Feature: gene Location: 41708-42115 bp Feature: gene Location: 42102-43232 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42312-43026 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 423 12-43 026 bp Feature: gene Location: 43534-43890 bp Feature: gene Location: 43937-45388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VZBQ01000029.1 Prevotella copri strain iP54 NODE_17_length_75647_cov_69.1178_ID_33, whole genome shotgun sequence (75644 bp)
Overview 1 RT 1: 5257-10653 bp Neighborhood of RT #1 [5257, 10653] XerC RVT-DGRs Feature: gene Location: 5257-6441 bp Feature: domain Description: XerC Location: 5662-6418 bp Feature: domain Description: XerC Location: 5662-64 18 bp Feature: gene Location: 6657-7049 bp Feature: gene Location: 7052-8623 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7262-8003 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7262-8003 bp Feature: gene Location: 8670-8954 bp Feature: gene Location: 9178-10653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerC (COG4973), RVT-DGRs

Seq: VZBQ01000151.1 Prevotella copri strain iP54 NODE_5_length_138868_cov_80.8437_ID_9, whole genome shotgun sequence (138868 bp)
Overview 1 RT 1: 109344-113322 bp Neighborhood of RT #1 [109344, 113322] RVT-DGRs Feature: gene Location: 109344-110768 bp Feature: gene Location: 110953-111195 bp Feature: gene Location: 111326-112060 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 111530-112034 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1115 30-112034 bp Feature: gene Location: 112123-112932 bp Feature: gene Location: 112933-113322 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs