myRT

myRT report for GCA_009494675.1_ASM949467v1

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Seq: VZBO01000035.1 Prevotella copri strain iAK1219 NODE_22_length_62859_cov_50.7138_ID_43, whole genome shotgun sequence (62859 bp)
Overview 1 RT 1: 14083-18113 bp Neighborhood of RT #1 [14083, 18113] DUF4062 SLATT_5 RVT-UG17 Feature: gene Location: 14083-15054 bp Feature: domain Description: DUF4062 Location: 14098-14356 bp Feature: domain Description: DUF4062 Location: 1 4098-1 4356 bp Feature: gene Location: 15098-15694 bp Feature: domain Description: SLATT_5 Location: 15104-15653 bp Feature: domain Description: SLATT_5 Location: 1 51 04-1 5653 bp Feature: gene Location: 15832-17214 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 16051-16666 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 6051 -1 6666 bp Feature: gene Location: 17377-17553 bp Feature: gene Location: 17910-18113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4062 (pfam13271), SLATT_5 (pfam18160), RVT-UG17

Seq: VZBO01000100.1 Prevotella copri strain iAK1219 NODE_39_length_27208_cov_65.0047_ID_77, whole genome shotgun sequence (27208 bp)
Overview 1 RT 1: 17374-22563 bp Neighborhood of RT #1 [17374, 22622] PRK09375 RVT-GII GIIM GT9_LPS_heptosyltransferase DUF4254 Feature: gene Location: 17374-18375 bp Feature: domain Description: PRK09375 Location: 17434-18370 bp Feature: domain Description: PRK09375 Location: 17434-18370 bp Feature: gene Location: 18687-18845 bp Feature: gene Location: 19226-20632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19568-20186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19568-2 0186 bp Feature: domain Description: GIIM Note: maturase Location: 20243-20444 bp Feature: domain Description: GIIM Note: maturase Location: 2 02 43-2 0444 bp Feature: gene Location: 20839-21924 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 20854-21904 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2 0854-2 1904 bp Feature: gene Location: 22020-22622 bp Feature: domain Description: DUF4254 Location: 22137-22563 bp Feature: domain Description: DUF42 54 Location: 2 2 137-2 2 563 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09375 (quinolinate synthase NadA), RVT-GII, GIIM (pfam08388), GT9_LPS_heptosyltransferase (cd03789), DUF4254 (pfam14063)

Seq: VZBO01000066.1 Prevotella copri strain iAK1219 NODE_5_length_128552_cov_59.0217_ID_9, whole genome shotgun sequence (128552 bp)
Overview 1 RT 1: 65190-70825 bp Neighborhood of RT #1 [65190, 70825] thrS UMPK_like NptA RVT-GII GIIM Feature: gene Location: 65190-66851 bp Feature: domain Description: thrS Location: 65205-65796 bp Feature: domain Description: thrS Location: 65205-65796 bp Feature: domain Description: UMPK_like Location: 66060-66651 bp Feature: domain Description: UMPK_like Location: 66060-66651 bp Feature: gene Location: 67024-68733 bp Feature: domain Description: NptA Location: 67039-68710 bp Feature: domain Description: NptA Location: 6703 9-68710 bp Feature: gene Location: 68859-70265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69204-69819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69204-69819 bp Feature: domain Description: GIIM Note: maturase Location: 69873-70086 bp Feature: domain Description: GIIM Note: maturase Location: 69873 -70086 bp Feature: gene Location: 70311-70481 bp Feature: gene Location: 70670-70825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT thrS (TIGR00418), UMPK_like (cd02028), NptA (COG1283), RVT-GII, GIIM (pfam08388)