myRT

myRT report for GCA_009494795.1_ASM949479v1

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Seq: VZBJ01000062.1 Prevotella copri strain iAK2651 NODE_42_length_27304_cov_51.6833_ID_83, whole genome shotgun sequence (27304 bp)
Overview 1 RT 1: 17471-22660 bp Neighborhood of RT #1 [17471, 22719] PRK09375 RVT-GII GIIM GT9_LPS_heptosyltransferase DUF4254 Feature: gene Location: 17471-18472 bp Feature: domain Description: PRK09375 Location: 17531-18467 bp Feature: domain Description: PRK09375 Location: 1 7531 -1 8467 bp Feature: gene Location: 18784-18942 bp Feature: gene Location: 19323-20729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19665-20283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9665-20283 bp Feature: domain Description: GIIM Note: maturase Location: 20340-20541 bp Feature: domain Description: GIIM Note: maturase Location: 20340-20541 bp Feature: gene Location: 20936-22021 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 20951-22001 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 20951 -22001 bp Feature: gene Location: 22117-22719 bp Feature: domain Description: DUF4254 Location: 22234-22660 bp Feature: domain Description: DUF4254 Location: 22234-22660 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09375 (quinolinate synthase NadA), RVT-GII, GIIM (pfam08388), GT9_LPS_heptosyltransferase (cd03789), DUF4254 (pfam14063)

Seq: VZBJ01000051.1 Prevotella copri strain iAK2651 NODE_5_length_142285_cov_44.7684_ID_9, whole genome shotgun sequence (142285 bp)
Overview 1 RT 1: 78923-84558 bp Neighborhood of RT #1 [78923, 84558] thrS UMPK_like NptA RVT-GII GIIM Feature: gene Location: 78923-80584 bp Feature: domain Description: thrS Location: 78938-79529 bp Feature: domain Description: thrS Location: 78938-7952 9 bp Feature: domain Description: UMPK_like Location: 79793-80384 bp Feature: domain Description: UMPK_like Location: 79793-80384 bp Feature: gene Location: 80757-82466 bp Feature: domain Description: NptA Location: 80772-82443 bp Feature: domain Description: NptA Location: 80772 -82 443 bp Feature: gene Location: 82592-83998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82937-83552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 937-83552 bp Feature: domain Description: GIIM Note: maturase Location: 83606-83819 bp Feature: domain Description: GIIM Note: maturase Location: 83606-83819 bp Feature: gene Location: 84044-84214 bp Feature: gene Location: 84403-84558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT thrS (TIGR00418), UMPK_like (cd02028), NptA (COG1283), RVT-GII, GIIM (pfam08388)

Seq: VZBJ01000002.1 Prevotella copri strain iAK2651 NODE_67_length_10179_cov_42.4894_ID_133, whole genome shotgun sequence (10179 bp)
Overview 1 RT 1: 6201-9289 bp Neighborhood of RT #1 [6201, 9987] RVT-UG17 SLATT_5 DUF4062 Feature: gene Location: 6201-6344 bp Feature: gene Location: 6517-6693 bp Feature: gene Location: 6856-8238 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 7075-7690 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 7075-7690 bp Feature: gene Location: 8376-8972 bp Feature: domain Description: SLATT_5 Location: 8382-8931 bp Feature: domain Description: SLATT_5 Location: 83 82-893 1 bp Feature: gene Location: 9016-9987 bp Feature: domain Description: DUF4062 Location: 9031-9289 bp Feature: domain Description: DUF4062 Location: 903 1-9289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), DUF4062 (pfam13271)