myRT

myRT report for GCA_009494805.1_ASM949480v1

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Seq: VZBG01000110.1 Prevotella copri strain iAK2713 NODE_19_length_62457_cov_23.2955_ID_37, whole genome shotgun sequence (62457 bp)
Overview 1 RT 1: 14052-18082 bp Neighborhood of RT #1 [14052, 18082] DUF4062 SLATT_5 RVT-UG17 Feature: gene Location: 14052-15023 bp Feature: domain Description: DUF4062 Location: 14067-14325 bp Feature: domain Description: DUF4062 Location: 1 4067-1 4325 bp Feature: gene Location: 15067-15663 bp Feature: domain Description: SLATT_5 Location: 15073-15622 bp Feature: domain Description: SLATT_5 Location: 1 5073-1 5622 bp Feature: gene Location: 15801-17183 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 16020-16635 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 6020-1 6635 bp Feature: gene Location: 17346-17522 bp Feature: gene Location: 17879-18082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4062 (pfam13271), SLATT_5 (pfam18160), RVT-UG17

Seq: VZBG01000005.1 Prevotella copri strain iAK2713 NODE_42_length_27197_cov_30.2495_ID_83, whole genome shotgun sequence (27197 bp)
Overview 1 RT 1: 17363-22552 bp Neighborhood of RT #1 [17363, 22611] PRK09375 RVT-GII GIIM GT9_LPS_heptosyltransferase DUF4254 Feature: gene Location: 17363-18364 bp Feature: domain Description: PRK09375 Location: 17423-18359 bp Feature: domain Description: PRK09375 Location: 1742 3-18359 bp Feature: gene Location: 18676-18834 bp Feature: gene Location: 19215-20621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19557-20175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19557-2 0175 bp Feature: domain Description: GIIM Note: maturase Location: 20232-20433 bp Feature: domain Description: GIIM Note: maturase Location: 2 02 32 -2 0433 bp Feature: gene Location: 20828-21913 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 20843-21893 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2 0843-2 1893 bp Feature: gene Location: 22009-22611 bp Feature: domain Description: DUF4254 Location: 22126-22552 bp Feature: domain Description: DUF42 54 Location: 2 2 12 6-2 2 552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09375 (quinolinate synthase NadA), RVT-GII, GIIM (pfam08388), GT9_LPS_heptosyltransferase (cd03789), DUF4254 (pfam14063)

Seq: VZBG01000066.1 Prevotella copri strain iAK2713 NODE_5_length_125586_cov_25.5053_ID_9, whole genome shotgun sequence (125586 bp)
Overview 1 RT 1: 54775-60210 bp Neighborhood of RT #1 [54775, 60410] RVT-GII GIIM NptA thrS UMPK_like Feature: gene Location: 54775-54930 bp Feature: gene Location: 55119-55289 bp Feature: gene Location: 55335-56741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55680-56295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55680-56295 bp Feature: domain Description: GIIM Note: maturase Location: 56349-56562 bp Feature: domain Description: GIIM Note: maturase Location: 563 49-56562 bp Feature: gene Location: 56867-58576 bp Feature: domain Description: NptA Location: 56882-58553 bp Feature: domain Description: NptA Location: 56882-58553 bp Feature: gene Location: 58749-60410 bp Feature: domain Description: thrS Location: 58764-59355 bp Feature: domain Description: thrS Location: 58764-593 55 bp Feature: domain Description: UMPK_like Location: 59619-60210 bp Feature: domain Description: UMPK_like Location: 59619-60210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), NptA (COG1283), thrS (TIGR00418), UMPK_like (cd02028)