myRT

myRT report for GCA_009494955.1_ASM949495v1

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Seq: VZAZ01000030.1 Prevotella copri strain BVe41219 NODE_15_length_75905_cov_63.9192_ID_29, whole genome shotgun sequence (75905 bp)
Overview 1 RT 1: 11060-16210 bp 2 RT 2: 25499-30417 bp Neighborhood of RT #1 [11060, 16230] FldA NapF RVT-GII LysR YeiH Neighborhood of RT #2 [25499, 30417] WG_beta_rep RVT-GII GIIM Feature: gene Location: 11060-11497 bp Feature: gene Location: 11502-12296 bp Feature: domain Description: FldA Location: 11511-11787 bp Feature: domain Description: FldA Location: 1 1 51 1 -1 1 787 bp Feature: domain Description: NapF Location: 12015-12237 bp Feature: domain Description: NapF Location: 1 201 5-1 2237 bp Feature: gene Location: 12957-14036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13161-13818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 61 -1 381 8 bp Feature: gene Location: 14121-15098 bp Feature: domain Description: LysR Location: 14220-15060 bp Feature: domain Description: LysR Location: 1 4220-1 5060 bp Feature: gene Location: 15184-16230 bp Feature: domain Description: YeiH Location: 15202-16210 bp Feature: domain Description: YeiH Location: 1 5202-1 621 0 bp Feature: gene Location: 25499-26932 bp Feature: gene Location: 27260-27478 bp Feature: domain Description: WG_beta_rep Location: 27359-27443 bp Feature: domain Description: WG_beta_rep Location: 27359-27443 bp Feature: gene Location: 28076-29482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28418-29036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2841 8-29036 bp Feature: domain Description: GIIM Note: maturase Location: 29090-29300 bp Feature: domain Description: GIIM Note: maturase Location: 29090-29300 bp Feature: gene Location: 29835-29975 bp Feature: gene Location: 30082-30417 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FldA (COG0716), NapF (COG1145), RVT-GII, LysR (COG0583), YeiH (COG2855), WG_beta_rep (pfam14903), GIIM (pfam08388)

Seq: VZAZ01000001.1 Prevotella copri strain BVe41219 NODE_2_length_261352_cov_40.2429_ID_3, whole genome shotgun sequence (261353 bp)
Overview 1 RT 1: 107948-112747 bp Neighborhood of RT #1 [107948, 112747] RVT-DGRs Feature: gene Location: 107948-108337 bp Feature: gene Location: 108338-109147 bp Feature: gene Location: 109210-109944 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 109414-109921 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 109414-10992 1 bp Feature: gene Location: 110075-111532 bp Feature: gene Location: 111539-112747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VZAZ01000049.1 Prevotella copri strain BVe41219 NODE_4_length_204969_cov_42.1996_ID_7, whole genome shotgun sequence (204969 bp)
Overview 1 RT 1: 61995-73682 bp Neighborhood of RT #1 [61995, 73682] Gph RVT-DGRs Feature: gene Location: 61995-62147 bp Feature: domain Description: Gph Location: 62001-62142 bp Feature: domain Description: Gph Location: 62001-62142 bp Feature: gene Location: 62283-62759 bp Feature: gene Location: 62805-64106 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 63015-63609 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 63 015-63 609 bp Feature: gene Location: 64503-72830 bp Feature: gene Location: 72834-73682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Gph (COG0546), RVT-DGRs

Seq: VZAZ01000060.1 Prevotella copri strain BVe41219 NODE_70_length_1732_cov_194.424_ID_139, whole genome shotgun sequence (1732 bp)
Overview 1 RT 1: 106-1728 bp Neighborhood of RT #1 [106, 1728] RVT-GII GIIM Feature: gene Location: 106-1512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451-1066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 51-1066 bp Feature: domain Description: GIIM Note: maturase Location: 1120-1333 bp Feature: domain Description: GIIM Note: maturase Location: 1120-1333 bp Feature: gene Location: 1558-1728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)