myRT

myRT report for GCA_009495075.1_ASM949507v1

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Seq: VZAS01000086.1 Prevotella copri strain iP105 NODE_129_length_2503_cov_378.604_ID_257, whole genome shotgun sequence (2503 bp)
Overview 1 RT 1: 581-2045 bp Neighborhood of RT #1 [581, 2383] RVT-GII Intron_maturas2 Feature: gene Location: 581-2383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 845-1667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 845-1 667 bp Feature: domain Description: Intron_maturas2 Location: 1826-2045 bp Feature: domain Description: Intron_maturas2 Location: 1 826-2045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: VZAS01000144.1 Prevotella copri strain iP105 NODE_131_length_2492_cov_540.06_ID_261, whole genome shotgun sequence (2492 bp)
Overview 1 RT 1: 127-1486 bp Neighborhood of RT #1 [127, 1863] RVT_N RVT-GII YkfC Feature: gene Location: 127-1863 bp Feature: RT Description: RVT_N Location: 250-493 bp Feature: RT Description: RVT_N Location: 2 50-493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538-1186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538-1186 bp Feature: domain Description: YkfC Location: 1396-1486 bp Feature: domain Description: YkfC Location: 1396-1486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: VZAS01000062.1 Prevotella copri strain iP105 NODE_148_length_1968_cov_2.05802_ID_295, whole genome shotgun sequence (1968 bp)
Overview 1 RT 1: 242-1685 bp Neighborhood of RT #1 [242, 1864] RVT-GII GIIM Feature: gene Location: 242-412 bp Feature: gene Location: 458-1864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 800-1418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 800-1418 bp Feature: domain Description: GIIM Note: maturase Location: 1472-1685 bp Feature: domain Description: GIIM Note: maturase Location: 1472-1685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VZAS01000179.1 Prevotella copri strain iP105 NODE_16_length_75708_cov_76.0455_ID_31, whole genome shotgun sequence (75708 bp)
Overview 1 RT 1: 64992-70365 bp Neighborhood of RT #1 [64992, 70388] RVT-DGRs XerC Feature: gene Location: 64992-66467 bp Feature: gene Location: 66691-66975 bp Feature: gene Location: 67022-68593 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 67232-67973 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 67232-67973 bp Feature: gene Location: 68596-68988 bp Feature: gene Location: 69204-70388 bp Feature: domain Description: XerC Location: 69609-70365 bp Feature: domain Description: XerC Location: 69609-70365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, XerC (COG4973)

Seq: VZAS01000054.1 Prevotella copri strain iP105 NODE_26_length_60573_cov_216.288_ID_51, whole genome shotgun sequence (60573 bp)
Overview 1 RT 1: 36120-42462 bp Neighborhood of RT #1 [36120, 42462] RVT-Retrons Feature: gene Location: 36120-36311 bp Feature: gene Location: 36637-37968 bp Feature: gene Location: 38130-39170 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38352-38925 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3835 2-38925 bp Feature: gene Location: 39312-40559 bp Feature: gene Location: 40630-42462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: VZAS01000183.1 Prevotella copri strain iP105 NODE_30_length_54733_cov_92.4407_ID_59, whole genome shotgun sequence (54733 bp)
Overview 1 RT 1: 40411-48639 bp Neighborhood of RT #1 [40411, 48639] RVT-DGRs Feature: gene Location: 40411-41862 bp Feature: gene Location: 41909-42265 bp Feature: gene Location: 42567-43697 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42777-43491 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42777-43491 bp Feature: gene Location: 43684-44091 bp Feature: gene Location: 44281-48639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VZAS01000004.1 Prevotella copri strain iP105 NODE_3_length_138910_cov_90.1369_ID_5, whole genome shotgun sequence (138910 bp)
Overview 1 RT 1: 109344-113323 bp Neighborhood of RT #1 [109344, 113323] RVT-DGRs Feature: gene Location: 109344-110768 bp Feature: gene Location: 110918-111196 bp Feature: gene Location: 111327-112061 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 111531-112035 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 111531-112035 bp Feature: gene Location: 112124-112933 bp Feature: gene Location: 112934-113323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs