myRT

myRT report for GCA_009495085.1_ASM949508v1

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Seq: VZAT01000004.1 Prevotella copri strain iAK2716 NODE_21_length_62860_cov_54.0095_ID_41, whole genome shotgun sequence (62860 bp)
Overview 1 RT 1: 14084-18114 bp Neighborhood of RT #1 [14084, 18114] DUF4062 SLATT_5 RVT-UG17 Feature: gene Location: 14084-15055 bp Feature: domain Description: DUF4062 Location: 14099-14357 bp Feature: domain Description: DUF4062 Location: 1 4099-1 4357 bp Feature: gene Location: 15099-15695 bp Feature: domain Description: SLATT_5 Location: 15105-15654 bp Feature: domain Description: SLATT_5 Location: 1 51 05-1 5654 bp Feature: gene Location: 15833-17215 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 16052-16667 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 6052-1 6667 bp Feature: gene Location: 17378-17554 bp Feature: gene Location: 17911-18114 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4062 (pfam13271), SLATT_5 (pfam18160), RVT-UG17

Seq: VZAT01000014.1 Prevotella copri strain iAK2716 NODE_43_length_27208_cov_57.2014_ID_85, whole genome shotgun sequence (27208 bp)
Overview 1 RT 1: 17374-22563 bp Neighborhood of RT #1 [17374, 22622] PRK09375 RVT-GII GIIM GT9_LPS_heptosyltransferase DUF4254 Feature: gene Location: 17374-18375 bp Feature: domain Description: PRK09375 Location: 17434-18370 bp Feature: domain Description: PRK09375 Location: 17434-18370 bp Feature: gene Location: 18687-18845 bp Feature: gene Location: 19226-20632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19568-20186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19568-2 0186 bp Feature: domain Description: GIIM Note: maturase Location: 20243-20444 bp Feature: domain Description: GIIM Note: maturase Location: 2 02 43-2 0444 bp Feature: gene Location: 20839-21924 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 20854-21904 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2 0854-2 1904 bp Feature: gene Location: 22020-22622 bp Feature: domain Description: DUF4254 Location: 22137-22563 bp Feature: domain Description: DUF42 54 Location: 2 2 137-2 2 563 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09375 (quinolinate synthase NadA), RVT-GII, GIIM (pfam08388), GT9_LPS_heptosyltransferase (cd03789), DUF4254 (pfam14063)

Seq: VZAT01000063.1 Prevotella copri strain iAK2716 NODE_4_length_128557_cov_54.6504_ID_7, whole genome shotgun sequence (128557 bp)
Overview 1 RT 1: 65195-70830 bp Neighborhood of RT #1 [65195, 70830] thrS UMPK_like NptA RVT-GII GIIM Feature: gene Location: 65195-66856 bp Feature: domain Description: thrS Location: 65210-65801 bp Feature: domain Description: thrS Location: 65210-65801 bp Feature: domain Description: UMPK_like Location: 66065-66656 bp Feature: domain Description: UMPK_like Location: 66065-66656 bp Feature: gene Location: 67029-68738 bp Feature: domain Description: NptA Location: 67044-68715 bp Feature: domain Description: NptA Location: 67044-68715 bp Feature: gene Location: 68864-70270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69209-69824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69209-69824 bp Feature: domain Description: GIIM Note: maturase Location: 69878-70091 bp Feature: domain Description: GIIM Note: maturase Location: 69878-70091 bp Feature: gene Location: 70316-70486 bp Feature: gene Location: 70675-70830 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT thrS (TIGR00418), UMPK_like (cd02028), NptA (COG1283), RVT-GII, GIIM (pfam08388)