myRT

myRT report for GCA_009495165.1_ASM949516v1

Download annotations/find similar RTs

Seq: VZAN01000208.1 Prevotella copri strain iK21512 NODE_16_length_7972_cov_2.24201_ID_85, whole genome shotgun sequence (7972 bp)
Overview 1 RT 1: 320-2735 bp Neighborhood of RT #1 [320, 2735] DpnD-PcfM RVT-UG27 Feature: gene Location: 320-550 bp Feature: domain Description: DpnD-PcfM Location: 332-461 bp Feature: domain Description: DpnD-PcfM Location: 332-461 bp Feature: gene Location: 599-778 bp Feature: gene Location: 811-2076 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1003-1636 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1 003-1 636 bp Feature: gene Location: 2264-2422 bp Feature: gene Location: 2433-2735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DpnD-PcfM (pfam14207), RVT-UG27

Seq: VZAN01000777.1 Prevotella copri strain iK21512 NODE_514_length_1934_cov_38.3539_ID_2739, whole genome shotgun sequence (1934 bp)
Overview 1 RT 1: 103-1932 bp Neighborhood of RT #1 [103, 1932] RVT-GII GIIM Feature: gene Location: 103-1506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1063 bp Feature: domain Description: GIIM Note: maturase Location: 1117-1327 bp Feature: domain Description: GIIM Note: maturase Location: 1117-132 7 bp Feature: gene Location: 1738-1932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VZAN01000161.1 Prevotella copri strain iK21512 NODE_515_length_1927_cov_2.37607_ID_9, whole genome shotgun sequence (1927 bp)
Overview 1 RT 1: 2-1924 bp Neighborhood of RT #1 [2, 1924] RVT-DGRs Feature: gene Location: 2-535 bp Feature: gene Location: 598-1332 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 802-1306 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 802-13 06 bp Feature: gene Location: 1727-1924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VZAN01000333.1 Prevotella copri strain iK21512 NODE_94_length_4511_cov_2.55476_ID_921, whole genome shotgun sequence (4511 bp)
Overview 1 RT 1: 2-3369 bp Neighborhood of RT #1 [2, 3369] RVT-DGRs Feature: gene Location: 2-232 bp Feature: gene Location: 396-1766 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 660-1257 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 660-1257 bp Feature: gene Location: 1796-2206 bp Feature: gene Location: 2224-3369 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs