myRT

myRT report for GCA_009495335.1_ASM949533v1

Download annotations/find similar RTs

Seq: VZAH01000073.1 Prevotella copri strain iAA917 NODE_130_length_1942_cov_138.617_ID_259, whole genome shotgun sequence (1942 bp)
Overview 1 RT 1: 2-1727 bp Neighborhood of RT #1 [2, 1828] RVT-GII GIIM Feature: gene Location: 2-253 bp Feature: gene Location: 566-1828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 770-1427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 770-1 427 bp Feature: domain Description: GIIM Note: maturase Location: 1511-1727 bp Feature: domain Description: GIIM Note: maturase Location: 1 51 1 -1 727 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VZAH01000128.1 Prevotella copri strain iAA917 NODE_133_length_1879_cov_167.02_ID_265, whole genome shotgun sequence (1879 bp)
Overview 1 RT 1: 103-1327 bp Neighborhood of RT #1 [103, 1506] RVT-GII GIIM Feature: gene Location: 103-1506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1063 bp Feature: domain Description: GIIM Note: maturase Location: 1117-1327 bp Feature: domain Description: GIIM Note: maturase Location: 1117-132 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VZAH01000078.1 Prevotella copri strain iAA917 NODE_1_length_166847_cov_18.3174_ID_1, whole genome shotgun sequence (166847 bp)
Overview 1 RT 1: 91653-96014 bp Neighborhood of RT #1 [91653, 96014] RVT-DGRs RVT-DGRs Feature: gene Location: 91653-93125 bp Feature: gene Location: 93141-93371 bp Feature: gene Location: 93698-95299 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 93905-94418 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 93 905-94418 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 94442-94646 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 94442-94646 bp Feature: gene Location: 95303-95692 bp Feature: gene Location: 95778-96014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VZAH01000135.1 Prevotella copri strain iAA917 NODE_64_length_15501_cov_13.4162_ID_127, whole genome shotgun sequence (15501 bp)
Overview 1 RT 1: 244-8036 bp Neighborhood of RT #1 [244, 8542] RVT-GII YkfC RVT_N RVT-GII COG4646 N6_Mtase Feature: gene Location: 244-1446 bp Feature: gene Location: 1400-2518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1403-1841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 03-184 1 bp Feature: domain Description: YkfC Location: 2051-2141 bp Feature: domain Description: YkfC Location: 2051-214 1 bp Feature: gene Location: 2525-3136 bp Feature: RT Description: RVT_N Location: 2648-2891 bp Feature: RT Description: RVT_N Location: 264 8-2891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2936-3122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2936-3122 bp Feature: gene Location: 3742-7005 bp Feature: domain Description: COG4646 Location: 4558-6625 bp Feature: domain Description: COG4 64 6 Location: 4 558-6625 bp Feature: gene Location: 7016-8542 bp Feature: domain Description: N6_Mtase Location: 7328-8036 bp Feature: domain Description: N6_Mtase Location: 7328-8036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YkfC (COG3344), RVT_N (pfam13655), COG4646 (Adenine-specific DNA methylase, N12 class ), N6_Mtase (pfam02384)