myRT

myRT report for GCA_009495855.1_ASM949585v1

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Seq: WHUI01000019.1 Streptococcus agalactiae strain GCH2, whole genome shotgun sequence (237032 bp)
Overview 1 RT 1: 21640-31809 bp Neighborhood of RT #1 [21640, 31809] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 21640-21939 bp Feature: gene Location: 22010-23353 bp Feature: domain Description: KOG1000 Location: 22289-22604 bp Feature: domain Description: KOG1 000 Location: 22289-22604 bp Feature: gene Location: 23491-25269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23752-24544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23752-24544 bp Feature: domain Description: Intron_maturas2 Location: 24649-24880 bp Feature: domain Description: Intron_maturas2 Location: 24649-24880 bp Feature: domain Description: HNHc Note: nucleases Location: 25045-25231 bp Feature: domain Description: HNHc Note: nucleases Location: 25045-25231 bp Feature: gene Location: 25767-31208 bp Feature: domain Description: N6_Mtase Location: 27759-28350 bp Feature: domain Description: N6_Mtase Location: 27759-28350 bp Feature: domain Description: COG4646 Location: 28944-31065 bp Feature: domain Description: COG4646 Location: 28944-31 065 bp Feature: gene Location: 31258-31809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: WHUI01000004.1 Streptococcus agalactiae strain GCH2, whole genome shotgun sequence (221957 bp)
Overview 1 RT 1: 116500-119380 bp Neighborhood of RT #1 [116500, 119553] PRK07275 PRK07275 RVT-GII GIIM HTH_XRE Feature: gene Location: 116500-116916 bp Feature: domain Description: PRK07275 Location: 116503-116839 bp Feature: domain Description: PRK072 75 Location: 116503-116839 bp Feature: domain Description: PRK07275 Location: 116866-116914 bp Feature: domain Description: PRK072 75 Location: 116866-116914 bp Feature: gene Location: 117067-117255 bp Feature: gene Location: 117497-118816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117797-118430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117797-118430 bp Feature: domain Description: GIIM Note: maturase Location: 118499-118721 bp Feature: domain Description: GIIM Note: maturase Location: 118499-11872 1 bp Feature: gene Location: 118949-119209 bp Feature: gene Location: 119206-119553 bp Feature: domain Description: HTH_XRE Location: 119218-119380 bp Feature: domain Description: HTH_XRE Location: 1192 18-119380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07275 (single-stranded DNA-binding protein; Provisional), RVT-GII, GIIM (pfam08388), HTH_XRE (smart00530)