myRT

myRT report for GCA_009497145.2_ASM949714v2

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Seq: WIPD02000005.1 Escherichia coli strain Fec6 plasmid pFec6_1 unitig_3, whole genome shotgun sequence (116423 bp)
Overview 1 RT 1: 63428-68059 bp Neighborhood of RT #1 [63428, 68244] InsE PHA02517 RVT-GII GIIM PHA02517 Rep_3 Feature: gene Location: 63428-63751 bp Feature: domain Description: InsE Location: 63440-63749 bp Feature: domain Description: InsE Location: 63440-63749 bp Feature: gene Location: 63751-64230 bp Feature: domain Description: PHA02517 Location: 63811-64165 bp Feature: domain Description: PHA0251 7 Location: 6381 1 -641 65 bp Feature: gene Location: 64822-66345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65095-65827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65095-65827 bp Feature: domain Description: GIIM Note: maturase Location: 65902-66100 bp Feature: domain Description: GIIM Note: maturase Location: 65902-661 00 bp Feature: gene Location: 66462-66908 bp Feature: domain Description: PHA02517 Location: 66465-66906 bp Feature: domain Description: PHA0251 7 Location: 66465-66906 bp Feature: gene Location: 67234-68244 bp Feature: domain Description: Rep_3 Location: 67306-68059 bp Feature: domain Description: Rep_3 Location: 67306-68059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Rep_3 (pfam01051)

Seq: WIPD02000001.1 Escherichia coli strain Fec6 unitig_0, whole genome shotgun sequence (5121884 bp)
Overview 1 RT 1: 1412351-1416743 bp 2 RT 2: 2843983-2848456 bp 3 RT 3: 3406266-3410066 bp Neighborhood of RT #1 [1412351, 1416859] InsE PHA02517 RVT-GII GIIM PHA02517 COG3547 Neighborhood of RT #2 [2843983, 2848518] MASE4 GGDEF Tra5 RVT-GII GIIM PHA02517 Neighborhood of RT #3 [3406266, 3410066] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 1412351-1412650 bp Feature: domain Description: InsE Location: 1412378-1412645 bp Feature: domain Description: InsE Location: 1412 378-1412 645 bp Feature: gene Location: 1412647-1413126 bp Feature: domain Description: PHA02517 Location: 1412713-1413064 bp Feature: domain Description: PHA02 517 Location: 1412 713-1413064 bp Feature: gene Location: 1413718-1415241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1413991-1414723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1413991-141472 3 bp Feature: domain Description: GIIM Note: maturase Location: 1414798-1414996 bp Feature: domain Description: GIIM Note: maturase Location: 1414798-1414996 bp Feature: gene Location: 1415406-1415564 bp Feature: domain Description: PHA02517 Location: 1415409-1415529 bp Feature: domain Description: PHA02 517 Location: 1415409-141552 9 bp Feature: gene Location: 1415783-1416859 bp Feature: domain Description: COG3547 Location: 1415822-1416743 bp Feature: domain Description: COG3547 Location: 141582 2 -1416743 bp Feature: gene Location: 2843983-2845341 bp Feature: domain Description: MASE4 Location: 2844106-2844805 bp Feature: domain Description: MASE4 Location: 2 844106-2 844805 bp Feature: domain Description: GGDEF Location: 2844829-2845309 bp Feature: domain Description: GGDEF Location: 2 84482 9-2 845309 bp Feature: gene Location: 2845382-2845801 bp Feature: domain Description: Tra5 Location: 2845388-2845796 bp Feature: domain Description: Tra5 Location: 2 845388-2 845796 bp Feature: gene Location: 2845924-2847447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2846197-2846929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 846197-2 84692 9 bp Feature: domain Description: GIIM Note: maturase Location: 2847004-2847202 bp Feature: domain Description: GIIM Note: maturase Location: 2 847004-2 8472 02 bp Feature: gene Location: 2847518-2847826 bp Feature: gene Location: 2848039-2848518 bp Feature: domain Description: PHA02517 Location: 2848105-2848456 bp Feature: domain Description: PHA02 517 Location: 2 848105-2 848456 bp Feature: gene Location: 3406266-3406589 bp Feature: domain Description: InsE Location: 3406278-3406587 bp Feature: domain Description: InsE Location: 34062 78-3406587 bp Feature: gene Location: 3406589-3407068 bp Feature: domain Description: PHA02517 Location: 3406649-3407003 bp Feature: domain Description: PHA02 517 Location: 3406649-3407003 bp Feature: gene Location: 3407660-3409183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3407933-3408665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3407933-3408665 bp Feature: domain Description: GIIM Note: maturase Location: 3408740-3408938 bp Feature: domain Description: GIIM Note: maturase Location: 3408740-3408938 bp Feature: gene Location: 3409300-3409746 bp Feature: domain Description: PHA02517 Location: 3409303-3409744 bp Feature: domain Description: PHA02 517 Location: 3409303-3409744 bp Feature: gene Location: 3409914-3410066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), MASE4 (pfam17158), GGDEF (TIGR00254), Tra5 (COG2801)