myRT

myRT report for GCA_009497325.1_ASM949732v1

Download annotations/find similar RTs

Seq: WIKO01000029.1 Escherichia coli strain I21 scaffold_28, whole genome shotgun sequence (23207 bp)
Overview 1 RT 1: 17684-21788 bp Neighborhood of RT #1 [17684, 21802] InsG Transposase_20 RVT-GII GIIM rve_2 Feature: gene Location: 17684-17836 bp Feature: gene Location: 17863-19254 bp Feature: domain Description: InsG Location: 17866-18787 bp Feature: domain Description: InsG Location: 1 7866-1 8787 bp Feature: domain Description: Transposase_20 Location: 18910-19156 bp Feature: domain Description: Transposase_20 Location: 1 891 0-1 91 56 bp Feature: gene Location: 19641-21029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19971-20589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9971 -20589 bp Feature: domain Description: GIIM Note: maturase Location: 20637-20868 bp Feature: domain Description: GIIM Note: maturase Location: 20637-20868 bp Feature: gene Location: 21257-21574 bp Feature: gene Location: 21650-21802 bp Feature: domain Description: rve_2 Location: 21680-21788 bp Feature: domain Description: rve_2 Location: 21 680-21 788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsG (COG3385), Transposase_20 (pfam02371), RVT-GII, GIIM (pfam08388), rve_2 (pfam13333)

Seq: WIKO01000037.1 Escherichia coli strain I21 scaffold_36, whole genome shotgun sequence (7760 bp)
Overview 1 RT 1: 179-7402 bp Neighborhood of RT #1 [179, 7402] DDE_Tnp_IS66_C GIIM RVT-GII DDE_Tnp_IS66 COG3436 HTH_23 InsE RVT-GII RVT-GII Feature: gene Location: 179-325 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 191-302 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 191-302 bp Feature: gene Location: 442-813 bp Feature: domain Description: GIIM Note: maturase Location: 514-736 bp Feature: domain Description: GIIM Note: maturase Location: 514-736 bp Feature: gene Location: 962-1672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1163-1664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1163-1664 bp Feature: gene Location: 2124-2513 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2229-2472 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 2 2 9-2 472 bp Feature: gene Location: 2489-3565 bp Feature: domain Description: COG3436 Location: 2801-3272 bp Feature: domain Description: COG3436 Location: 2 801-32 72 bp Feature: gene Location: 3932-4582 bp Feature: domain Description: HTH_23 Location: 3983-4082 bp Feature: domain Description: HTH_2 3 Location: 3983-4082 bp Feature: domain Description: InsE Location: 4208-4559 bp Feature: domain Description: InsE Location: 42 08-4559 bp Feature: gene Location: 4954-5157 bp Feature: gene Location: 5564-5938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5570-5741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5570-5741 bp Feature: gene Location: 5954-6766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6227-6683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 2 7-6683 bp Feature: gene Location: 7169-7402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), DDE_Tnp_IS66 (pfam03050), COG3436 (Transposase ), GIIM (pfam08388), RVT-GII, HTH_23 (pfam13384), InsE (COG2963)