myRT

myRT report for GCA_009497455.1_ASM949745v1

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Seq: WIKR01000019.1 Escherichia coli strain B08 NODE_19_length_105005_cov_62.1921, whole genome shotgun sequence (105005 bp)
Overview 1 RT 1: 102596-104843 bp Neighborhood of RT #1 [102596, 104890] CbeA_antitoxin RVT-GII GIIM CbeA_antitoxin Feature: gene Location: 102596-102790 bp Feature: domain Description: CbeA_antitoxin Location: 102716-102773 bp Feature: domain Description: CbeA_antitoxin Location: 1 0271 6-1 02773 bp Feature: gene Location: 102831-103181 bp Feature: gene Location: 103208-104449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103415-104072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0341 5-1 04072 bp Feature: domain Description: GIIM Note: maturase Location: 104153-104375 bp Feature: domain Description: GIIM Note: maturase Location: 1 041 53-1 04375 bp Feature: gene Location: 104486-104890 bp Feature: domain Description: CbeA_antitoxin Location: 104597-104843 bp Feature: domain Description: CbeA_antitoxin Location: 1 04597-1 04843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CbeA_antitoxin (pfam06154), RVT-GII, GIIM (pfam08388)

Seq: WIKR01000042.1 Escherichia coli strain B08 NODE_42_length_9797_cov_75.9721, whole genome shotgun sequence (9797 bp)
Overview 1 RT 1: 699-2891 bp Neighborhood of RT #1 [699, 2950] PHA02517 InsE RVT-GII trans_reg_C Feature: gene Location: 699-1010 bp Feature: domain Description: PHA02517 Location: 771-966 bp Feature: domain Description: PHA02 517 Location: 771-966 bp Feature: gene Location: 1146-1355 bp Feature: domain Description: InsE Location: 1158-1332 bp Feature: domain Description: InsE Location: 1158-1332 bp Feature: gene Location: 1382-1837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1673-1763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1673-1763 bp Feature: gene Location: 2009-2350 bp Feature: gene Location: 2648-2950 bp Feature: domain Description: trans_reg_C Location: 2696-2891 bp Feature: domain Description: trans_reg_C Location: 2 696-2 891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, trans_reg_C (cd00383), PHA02517 (putative transposase OrfB; Reviewed)