myRT

myRT report for GCA_009498505.1_ASM949850v1

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Seq: QSNS01000016.1 Agrobacterium rhizogenes strain ICMP 4617 Scaffold16, whole genome shotgun sequence (111527 bp)
Overview 1 RT 1: 77407-81579 bp Neighborhood of RT #1 [77407, 81579] RVT-UG20 DUF2971 Feature: gene Location: 77407-77664 bp Feature: gene Location: 77728-77856 bp Feature: gene Location: 77959-79563 bp Feature: RT Description: RVT-UG20 Note: UG20 RT Location: 78307-78805 bp Feature: RT Description: RVT-UG20 Note: UG20 RT Location: 78307-78805 bp Feature: gene Location: 79717-80601 bp Feature: domain Description: DUF2971 Location: 80143-80389 bp Feature: domain Description: DUF2971 Location: 801 43-80389 bp Feature: gene Location: 80611-81579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG20, DUF2971 (pfam11185)

Seq: QSNS01000002.1 Agrobacterium rhizogenes strain ICMP 4617 Scaffold2, whole genome shotgun sequence (963012 bp)
Overview 1 RT 1: 720437-723975 bp Neighborhood of RT #1 [720437, 724025] Crp Rve RVT-GII GIIM Rve Feature: gene Location: 720437-721129 bp Feature: domain Description: Crp Location: 720467-721073 bp Feature: domain Description: Crp Location: 72 0467-72 1073 bp Feature: gene Location: 721528-722013 bp Feature: domain Description: Rve Location: 721558-721939 bp Feature: domain Description: Rve Location: 72 1558-72 1939 bp Feature: gene Location: 722052-723311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722256-722913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 2 2 56-72 2 913 bp Feature: domain Description: GIIM Note: maturase Location: 722994-723225 bp Feature: domain Description: GIIM Note: maturase Location: 72 2 994-72 32 2 5 bp Feature: gene Location: 723421-723597 bp Feature: gene Location: 723795-724025 bp Feature: domain Description: Rve Location: 723846-723975 bp Feature: domain Description: Rve Location: 72 3846-72 3975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Crp (pfam00325), Rve (COG3316), RVT-GII, GIIM (pfam08388)