myRT

myRT report for GCA_009498675.1_ASM949867v1

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Seq: ML762368.1 Bacillus paranthracis strain EFR-4 genomic scaffold scaffold20, whole genome shotgun sequence (74747 bp)
Overview 1 RT 1: 6747-11556 bp Neighborhood of RT #1 [6747, 11561] COG4712 RVT-GII beta_clamp Feature: gene Location: 6747-7103 bp Feature: domain Description: COG4712 Location: 6756-7098 bp Feature: domain Description: COG471 2 Location: 6756-7098 bp Feature: gene Location: 7527-7667 bp Feature: gene Location: 7862-9763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8180-8882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 80-8882 bp Feature: gene Location: 9841-10368 bp Feature: gene Location: 10449-11561 bp Feature: domain Description: beta_clamp Location: 10452-11556 bp Feature: domain Description: beta_clamp Location: 1 0452-1 1 556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT beta_clamp (cl29549), COG4712 (Uncharacterized protein ), RVT-GII

Seq: ML762378.1 Bacillus paranthracis strain EFR-4 genomic scaffold scaffold30, whole genome shotgun sequence (37826 bp)
Overview 1 RT 1: 29407-33098 bp Neighborhood of RT #1 [29407, 33133] HTH_17 RVT-GII Intron_maturas2 HNHc DNase_NucA_NucB YueH Feature: gene Location: 29407-29643 bp Feature: domain Description: HTH_17 Location: 29428-29635 bp Feature: domain Description: HTH_17 Location: 2 942 8-2 9635 bp Feature: gene Location: 29912-30076 bp Feature: gene Location: 30144-31937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30387-31218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30387-312 18 bp Feature: domain Description: Intron_maturas2 Location: 31299-31587 bp Feature: domain Description: Intron_maturas2 Location: 312 99-31587 bp Feature: domain Description: HNHc Note: nucleases Location: 31767-31908 bp Feature: domain Description: HNHc Note: nucleases Location: 31767-31908 bp Feature: gene Location: 32542-32859 bp Feature: domain Description: DNase_NucA_NucB Location: 32686-32845 bp Feature: domain Description: DNase_NucA_NucB Location: 32 686-32 845 bp Feature: gene Location: 32882-33133 bp Feature: domain Description: YueH Location: 32930-33098 bp Feature: domain Description: YueH Location: 32 930-33098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DNase_NucA_NucB (pfam14040), YueH (pfam14166)

Seq: ML762406.1 Bacillus paranthracis strain EFR-4 genomic scaffold scaffold58, whole genome shotgun sequence (2885 bp)
Overview 1 RT 1: 181-1993 bp Neighborhood of RT #1 [181, 2109] RVT-GII HNHc Feature: gene Location: 181-2109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502-1237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502-123 7 bp Feature: domain Description: HNHc Note: nucleases Location: 1828-1993 bp Feature: domain Description: HNHc Note: nucleases Location: 1828-1993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: ML762407.1 Bacillus paranthracis strain EFR-4 genomic scaffold scaffold59, whole genome shotgun sequence (2680 bp)
Overview 1 RT 1: 115-2389 bp Neighborhood of RT #1 [115, 2389] RVT-GII HNHc Feature: gene Location: 115-1947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 415-1120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 15-1120 bp Feature: domain Description: HNHc Note: nucleases Location: 1699-1831 bp Feature: domain Description: HNHc Note: nucleases Location: 1699-1831 bp Feature: gene Location: 2231-2389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: ML762410.1 Bacillus paranthracis strain EFR-4 genomic scaffold scaffold62, whole genome shotgun sequence (2368 bp)
Overview 1 RT 1: 110-2007 bp Neighborhood of RT #1 [110, 2007] RVT_N RVT-GII GIIM Feature: gene Location: 110-1756 bp Feature: RT Description: RVT_N Location: 152-389 bp Feature: RT Description: RVT_N Location: 15 2-389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443-1103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443-1103 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1403 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1403 bp Feature: gene Location: 1804-2007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)