myRT

myRT report for GCA_009599625.1_ASM959962v1

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Seq: WIRO01000106.1 Sinorhizobium meliloti strain KH12g contig_106, whole genome shotgun sequence (27321 bp)
Overview 1 RT 1: 25814-27319 bp Neighborhood of RT #1 [25814, 27318] RVT-GII Feature: gene Location: 25814-26116 bp Feature: gene Location: 26452-26691 bp Feature: gene Location: 26893-27318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27220-27319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27220-2731 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WIRO01000119.1 Sinorhizobium meliloti strain KH12g contig_119, whole genome shotgun sequence (96623 bp)
Overview 1 RT 1: 1729-6112 bp Neighborhood of RT #1 [1729, 6112] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 RVT-GII COG1708 Feature: gene Location: 1729-3132 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1810-2041 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1810-2 041 bp Feature: domain Description: zf-IS66 Location: 2068-2194 bp Feature: domain Description: zf-IS66 Location: 2 068-2 194 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2257-2707 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 2 57-2 707 bp Feature: gene Location: 3165-3566 bp Feature: domain Description: TnpB_IS66 Location: 3192-3477 bp Feature: domain Description: TnpB_IS66 Location: 3192 -3477 bp Feature: gene Location: 3677-4525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3680-4304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3680-4304 bp Feature: gene Location: 4765-5433 bp Feature: domain Description: COG1708 Location: 4921-5239 bp Feature: domain Description: COG1708 Location: 492 1-52 39 bp Feature: gene Location: 5444-6112 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717), RVT-GII, COG1708 (Predicted nucleotidyltransferase )

Seq: WIRO01000151.1 Sinorhizobium meliloti strain KH12g contig_151, whole genome shotgun sequence (35865 bp)
Overview 1 RT 1: 33615-35863 bp Neighborhood of RT #1 [33615, 35862] HTH_ARSR AraJ RVT-GII Feature: gene Location: 33615-33986 bp Feature: domain Description: HTH_ARSR Location: 33672-33870 bp Feature: domain Description: HTH_ARSR Location: 3 3 672-3 3 870 bp Feature: gene Location: 34076-35260 bp Feature: domain Description: AraJ Location: 34079-35237 bp Feature: domain Description: AraJ Location: 3 4079-3 523 7 bp Feature: gene Location: 35437-35862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35764-35863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 5764-3 5863 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), AraJ (COG2814), RVT-GII

Seq: WIRO01000045.1 Sinorhizobium meliloti strain KH12g contig_45, whole genome shotgun sequence (1531 bp)
Overview 1 RT 1: 89-1301 bp Neighborhood of RT #1 [89, 1450] RVT-GII GIIM Feature: gene Location: 89-1450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 16-1031 bp Feature: domain Description: GIIM Note: maturase Location: 1085-1301 bp Feature: domain Description: GIIM Note: maturase Location: 1085-1301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WIRO01000046.1 Sinorhizobium meliloti strain KH12g contig_46, whole genome shotgun sequence (92428 bp)
Overview 1 RT 1: 1-3808 bp Neighborhood of RT #1 [1, 3819] RVT-GII GIIM PRK09356 hutH Feature: gene Location: 1-837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-418 bp Feature: domain Description: GIIM Note: maturase Location: 472-688 bp Feature: domain Description: GIIM Note: maturase Location: 472-688 bp Feature: gene Location: 917-2287 bp Feature: domain Description: PRK09356 Location: 1076-2279 bp Feature: domain Description: PRK0935 6 Location: 1076-2279 bp Feature: gene Location: 2284-3819 bp Feature: domain Description: hutH Location: 2293-3808 bp Feature: domain Description: hutH Location: 2293-3808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), hutH (TIGR01225), PRK09356 (imidazolonepropionase; Validated)

Seq: WIRO01000007.1 Sinorhizobium meliloti strain KH12g contig_7, whole genome shotgun sequence (2004 bp)
Overview 1 RT 1: 2-2000 bp Neighborhood of RT #1 [2, 2002] RVT-GII GIIM COG3415 Feature: gene Location: 2-1162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 218-872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 218-872 bp Feature: domain Description: GIIM Note: maturase Location: 953-1154 bp Feature: domain Description: GIIM Note: maturase Location: 953-1154 bp Feature: gene Location: 1757-2002 bp Feature: domain Description: COG3415 Location: 1760-2000 bp Feature: domain Description: COG3415 Location: 176 0-2000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: WIRO01000083.1 Sinorhizobium meliloti strain KH12g contig_83, whole genome shotgun sequence (42377 bp)
Overview 1 RT 1: 40082-42225 bp Neighborhood of RT #1 [40082, 42374] fabG DUF3018 RVT-GII GIIM Feature: gene Location: 40082-40864 bp Feature: domain Description: fabG Location: 40100-40850 bp Feature: domain Description: fabG Location: 40100-40850 bp Feature: gene Location: 41001-41141 bp Feature: domain Description: DUF3018 Location: 41004-41133 bp Feature: domain Description: DUF3018 Location: 41004-41133 bp Feature: gene Location: 41541-42374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41544-41955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41544-41955 bp Feature: domain Description: GIIM Note: maturase Location: 42009-42225 bp Feature: domain Description: GIIM Note: maturase Location: 42009-42225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fabG (PRK12825), DUF3018 (pfam11455), RVT-GII, GIIM (pfam08388)

Seq: WIRO01000086.1 Sinorhizobium meliloti strain KH12g contig_86, whole genome shotgun sequence (1531 bp)
Overview 1 RT 1: 82-1294 bp Neighborhood of RT #1 [82, 1443] RVT-GII GIIM Feature: gene Location: 82-1443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-1024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-1024 bp Feature: domain Description: GIIM Note: maturase Location: 1078-1294 bp Feature: domain Description: GIIM Note: maturase Location: 1078 -1294 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)