myRT

myRT report for GCA_009599775.1_ASM959977v1

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Seq: WIRT01000148.1 Sinorhizobium medicae strain KH36b contig_148, whole genome shotgun sequence (4181 bp)
Overview 1 RT 1: 951-4180 bp Neighborhood of RT #1 [951, 4179] COG3436 RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 951-1712 bp Feature: domain Description: COG3436 Location: 1200-1677 bp Feature: domain Description: COG3436 Location: 1 200-1 677 bp Feature: gene Location: 1772-2680 bp Feature: gene Location: 2225-3484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2441-3095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2441 -3095 bp Feature: domain Description: GIIM Note: maturase Location: 3176-3392 bp Feature: domain Description: GIIM Note: maturase Location: 31 76-3392 bp Feature: gene Location: 3538-4179 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3571-4180 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3571 -41 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), COG3436 (Transposase )

Seq: WIRT01000162.1 Sinorhizobium medicae strain KH36b contig_162, whole genome shotgun sequence (22935 bp)
Overview 1 RT 1: 648-5046 bp Neighborhood of RT #1 [648, 5046] IS285 RVT-GII COG4185 Feature: gene Location: 648-1493 bp Feature: domain Description: IS285 Location: 654-1458 bp Feature: domain Description: IS2 85 Location: 654-1458 bp Feature: gene Location: 1569-1778 bp Feature: gene Location: 1935-3758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2673-3363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 673-3363 bp Feature: gene Location: 4139-4729 bp Feature: domain Description: COG4185 Location: 4148-4691 bp Feature: domain Description: COG4185 Location: 4148-4691 bp Feature: gene Location: 4819-5046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG4185 (Predicted ABC-type ATPase ), IS285 (COG3328)