myRT

myRT report for GCA_009599805.1_ASM959980v1

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Seq: WIRQ01000104.1 Sinorhizobium meliloti strain KH30a contig_104, whole genome shotgun sequence (28340 bp)
Overview 1 RT 1: 25817-28103 bp Neighborhood of RT #1 [25817, 28252] RVT-GII RVT-GII GIIM Feature: gene Location: 25817-26119 bp Feature: gene Location: 26455-26694 bp Feature: gene Location: 27075-27470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27219-27462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2721 9-27462 bp Feature: gene Location: 27545-28252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27548-27833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27548-27833 bp Feature: domain Description: GIIM Note: maturase Location: 27887-28103 bp Feature: domain Description: GIIM Note: maturase Location: 27887-281 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WIRQ01000105.1 Sinorhizobium meliloti strain KH30a contig_105, whole genome shotgun sequence (28344 bp)
Overview 1 RT 1: 25817-28107 bp Neighborhood of RT #1 [25817, 28256] RVT-GII GIIM Feature: gene Location: 25817-26119 bp Feature: gene Location: 26455-26694 bp Feature: gene Location: 27075-28256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27219-27837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 72 19-2 7837 bp Feature: domain Description: GIIM Note: maturase Location: 27891-28107 bp Feature: domain Description: GIIM Note: maturase Location: 2 7891-2 8107 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WIRQ01000003.1 Sinorhizobium meliloti strain KH30a contig_3, whole genome shotgun sequence (15935 bp)
Overview 1 RT 1: 13660-15934 bp Neighborhood of RT #1 [13660, 15933] HTH_ARSR AraJ RVT-GII Feature: gene Location: 13660-14031 bp Feature: domain Description: HTH_ARSR Location: 13717-13915 bp Feature: domain Description: HTH_ARSR Location: 13 717-13 915 bp Feature: gene Location: 14121-15305 bp Feature: domain Description: AraJ Location: 14124-15282 bp Feature: domain Description: AraJ Location: 14124-15282 bp Feature: gene Location: 15661-15933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15805-15934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15805-1593 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), AraJ (COG2814), RVT-GII

Seq: WIRQ01000062.1 Sinorhizobium meliloti strain KH30a contig_62, whole genome shotgun sequence (2942 bp)
Overview 1 RT 1: 17-2845 bp Neighborhood of RT #1 [17, 2847] COG3335 RVT-GII GIIM COG3415 Feature: gene Location: 17-490 bp Feature: domain Description: COG3335 Location: 95-479 bp Feature: domain Description: COG3335 Location: 95-4 79 bp Feature: gene Location: 586-1845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 802-1456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 802-14 56 bp Feature: domain Description: GIIM Note: maturase Location: 1537-1759 bp Feature: domain Description: GIIM Note: maturase Location: 1537-1759 bp Feature: gene Location: 2440-2847 bp Feature: domain Description: COG3415 Location: 2443-2845 bp Feature: domain Description: COG34 15 Location: 24 4 3-284 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3335 (Transposase ), COG3415 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: WIRQ01000085.1 Sinorhizobium meliloti strain KH30a contig_85, whole genome shotgun sequence (92344 bp)
Overview 1 RT 1: 1-3766 bp Neighborhood of RT #1 [1, 3777] RVT-GII GIIM PRK09356 hutH Feature: gene Location: 1-795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-376 bp Feature: domain Description: GIIM Note: maturase Location: 430-646 bp Feature: domain Description: GIIM Note: maturase Location: 430-646 bp Feature: gene Location: 875-2245 bp Feature: domain Description: PRK09356 Location: 1034-2237 bp Feature: domain Description: PRK0935 6 Location: 1034-2237 bp Feature: gene Location: 2242-3777 bp Feature: domain Description: hutH Location: 2251-3766 bp Feature: domain Description: hutH Location: 225 1-3766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), hutH (TIGR01225), PRK09356 (imidazolonepropionase; Validated)

Seq: WIRQ01000086.1 Sinorhizobium meliloti strain KH30a contig_86, whole genome shotgun sequence (149930 bp)
Overview 1 RT 1: 1-1427 bp Neighborhood of RT #1 [1, 1435] RVT-GII GIIM MazF DUF3018 Feature: gene Location: 1-795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-376 bp Feature: domain Description: GIIM Note: maturase Location: 430-646 bp Feature: domain Description: GIIM Note: maturase Location: 430-6 46 bp Feature: gene Location: 1095-1298 bp Feature: domain Description: MazF Location: 1098-1209 bp Feature: domain Description: MazF Location: 1098-1209 bp Feature: gene Location: 1295-1435 bp Feature: domain Description: DUF3018 Location: 1298-1427 bp Feature: domain Description: DUF3018 Location: 1298-1427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MazF (COG2337), DUF3018 (pfam11455), RVT-GII, GIIM (pfam08388)