myRT

myRT report for GCA_009599835.1_ASM959983v1

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Seq: WIRW01000106.1 Sinorhizobium meliloti strain KH46b contig_106, whole genome shotgun sequence (27331 bp)
Overview 1 RT 1: 1-1511 bp Neighborhood of RT #1 [1, 1511] RVT-GII Feature: gene Location: 1-429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-430 bp Feature: gene Location: 660-815 bp Feature: gene Location: 1209-1511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WIRW01000107.1 Sinorhizobium meliloti strain KH46b contig_107, whole genome shotgun sequence (6803 bp)
Overview 1 RT 1: 3003-6651 bp Neighborhood of RT #1 [3003, 6800] hutH PRK09356 RVT-GII GIIM Feature: gene Location: 3003-4538 bp Feature: domain Description: hutH Location: 3012-4527 bp Feature: domain Description: hutH Location: 3012 -452 7 bp Feature: gene Location: 4535-5905 bp Feature: domain Description: PRK09356 Location: 4694-5897 bp Feature: domain Description: PRK09356 Location: 4694-5897 bp Feature: gene Location: 5985-6800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5988-6381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5988-6381 bp Feature: domain Description: GIIM Note: maturase Location: 6435-6651 bp Feature: domain Description: GIIM Note: maturase Location: 6435-6651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hutH (TIGR01225), PRK09356 (imidazolonepropionase; Validated), RVT-GII, GIIM (pfam08388)

Seq: WIRW01000124.1 Sinorhizobium meliloti strain KH46b contig_124, whole genome shotgun sequence (2941 bp)
Overview 1 RT 1: 96-2915 bp Neighborhood of RT #1 [96, 2926] COG3415 RVT-GII GIIM COG3335 Feature: gene Location: 96-503 bp Feature: domain Description: COG3415 Location: 99-501 bp Feature: domain Description: COG3 415 Location: 99-501 bp Feature: gene Location: 1098-2357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1314-1968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 14-1968 bp Feature: domain Description: GIIM Note: maturase Location: 2049-2271 bp Feature: domain Description: GIIM Note: maturase Location: 2049-2271 bp Feature: gene Location: 2453-2926 bp Feature: domain Description: COG3335 Location: 2531-2915 bp Feature: domain Description: COG3 3 3 5 Location: 253 1-2915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3335 (Transposase ), COG3415 (Transposase )

Seq: WIRW01000144.1 Sinorhizobium meliloti strain KH46b contig_144, whole genome shotgun sequence (1464 bp)
Overview 1 RT 1: 89-1420 bp Neighborhood of RT #1 [89, 1449] RVT-GII GIIM RVT-GII Feature: gene Location: 89-796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92-377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92-377 bp Feature: domain Description: GIIM Note: maturase Location: 431-647 bp Feature: domain Description: GIIM Note: maturase Location: 4 31-64 7 bp Feature: gene Location: 871-1449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1198-1420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1198-14 20 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WIRW01000145.1 Sinorhizobium meliloti strain KH46b contig_145, whole genome shotgun sequence (1465 bp)
Overview 1 RT 1: 89-1301 bp Neighborhood of RT #1 [89, 1450] RVT-GII GIIM Feature: gene Location: 89-1450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1031 bp Feature: domain Description: GIIM Note: maturase Location: 1085-1301 bp Feature: domain Description: GIIM Note: maturase Location: 1085 -1301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WIRW01000146.1 Sinorhizobium meliloti strain KH46b contig_146, whole genome shotgun sequence (91455 bp)
Overview 1 RT 1: 1-1452 bp Neighborhood of RT #1 [1, 1460] RVT-GII GIIM MazF DUF3018 Feature: gene Location: 1-819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-400 bp Feature: domain Description: GIIM Note: maturase Location: 454-670 bp Feature: domain Description: GIIM Note: maturase Location: 454-6 70 bp Feature: gene Location: 1132-1323 bp Feature: domain Description: MazF Location: 1135-1246 bp Feature: domain Description: MazF Location: 1135-1246 bp Feature: gene Location: 1320-1460 bp Feature: domain Description: DUF3018 Location: 1323-1452 bp Feature: domain Description: DUF3018 Location: 1323-1452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MazF (COG2337), DUF3018 (pfam11455), RVT-GII, GIIM (pfam08388)

Seq: WIRW01000090.1 Sinorhizobium meliloti strain KH46b contig_90, whole genome shotgun sequence (15857 bp)
Overview 1 RT 1: 13607-15855 bp Neighborhood of RT #1 [13607, 15854] HTH_ARSR AraJ RVT-GII Feature: gene Location: 13607-13978 bp Feature: domain Description: HTH_ARSR Location: 13664-13862 bp Feature: domain Description: HTH_ARSR Location: 13664-13862 bp Feature: gene Location: 14068-15252 bp Feature: domain Description: AraJ Location: 14071-15229 bp Feature: domain Description: AraJ Location: 1407 1-15229 bp Feature: gene Location: 15429-15854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15756-15855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157 56-15855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), AraJ (COG2814), RVT-GII