myRT

myRT report for GCA_009599845.1_ASM959984v1

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Seq: WIRP01000102.1 Sinorhizobium meliloti strain KH16b contig_102, whole genome shotgun sequence (2744 bp)
Overview 1 RT 1: 3-2675 bp Neighborhood of RT #1 [3, 2677] DDE_3 RVT-GII GIIM COG3415 Feature: gene Location: 3-317 bp Feature: domain Description: DDE_3 Location: 18-318 bp Feature: domain Description: DDE_3 Location: 1 8-31 8 bp Feature: gene Location: 413-1675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 632-1286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 632-1 286 bp Feature: domain Description: GIIM Note: maturase Location: 1367-1589 bp Feature: domain Description: GIIM Note: maturase Location: 1 367-1 589 bp Feature: gene Location: 2270-2677 bp Feature: domain Description: COG3415 Location: 2273-2675 bp Feature: domain Description: COG341 5 Location: 2273-2675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388)

Seq: WIRP01000141.1 Sinorhizobium meliloti strain KH16b contig_141, whole genome shotgun sequence (1335 bp)
Overview 1 RT 1: 2-1333 bp Neighborhood of RT #1 [2, 1333] RVT-GII Feature: gene Location: 2-952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329-944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 9-944 bp Feature: gene Location: 1130-1333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WIRP01000155.1 Sinorhizobium meliloti strain KH16b contig_155, whole genome shotgun sequence (16150 bp)
Overview 1 RT 1: 13608-16148 bp Neighborhood of RT #1 [13608, 16147] HTH_ARSR AraJ RVT-GII Feature: gene Location: 13608-13979 bp Feature: domain Description: HTH_ARSR Location: 13665-13863 bp Feature: domain Description: HTH_ARSR Location: 13 665-13 863 bp Feature: gene Location: 14069-15253 bp Feature: domain Description: AraJ Location: 14072-15230 bp Feature: domain Description: AraJ Location: 14072-1523 0 bp Feature: gene Location: 15722-16147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16049-16148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16049-16148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), AraJ (COG2814), RVT-GII

Seq: WIRP01000042.1 Sinorhizobium meliloti strain KH16b contig_42, whole genome shotgun sequence (60654 bp)
Overview 1 RT 1: 59144-60652 bp Neighborhood of RT #1 [59144, 60651] RVT-GII Feature: gene Location: 59144-59446 bp Feature: gene Location: 59840-59995 bp Feature: gene Location: 60226-60651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60553-60652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60553-60652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WIRP01000053.1 Sinorhizobium meliloti strain KH16b contig_53, whole genome shotgun sequence (29313 bp)
Overview 1 RT 1: 27956-29311 bp Neighborhood of RT #1 [27956, 29310] RVT-GII Feature: gene Location: 27956-28195 bp Feature: gene Location: 28402-28683 bp Feature: gene Location: 28885-29310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29212-29311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29212-29311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WIRP01000063.1 Sinorhizobium meliloti strain KH16b contig_63, whole genome shotgun sequence (20364 bp)
Overview 1 RT 1: 19007-20362 bp Neighborhood of RT #1 [19007, 20361] RVT-GII Feature: gene Location: 19007-19246 bp Feature: gene Location: 19453-19734 bp Feature: gene Location: 19936-20361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20263-20362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2026 3-2036 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII